Transcript Information: R_Transcript_61662.p1


Annotated TAIR IDAT4G17950.1
Annotated Gene NameAT hook motif DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9967295-9969007 | Reverse length=439
E-Value3.7E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.572337716393
Replicate 220.948689757758
Replicate 323.010623027427
Condition 2: 8 Hour
Replicate 123.597488894737
Replicate 227.431376589754
Replicate 333.422013205792
Condition 3: 24 Hour
Replicate 137.013607571196
Replicate 231.257453076215
Replicate 336.628403761746


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61662.p1 GENE.R_Transcript_61662~~R_Transcript_61662.p1 ORF type:5prime_partial len:441 (+),score=100.45,DUF296|PF03479.11|4.8e-28 R_Transcript_61662:3-1325(+)
CGTGGGCCTTCAGCTCCACCACCACCCCATCACCAGCAACAATCCCATCACCACCATCACCACCACCACCACCAACAACAACAACACCAACACCAACATCACCACCACCACCAACAACAGCAACATCACCACCACCAACCATCACCTTCAAGTATGAGTATGATGATTCAGCACCCTACTTACCCAACACCAGCATCTCATAACATACCCAACTCATCAACCCCTCAAATGATCACCCCAAATTCCTCAGCTCAAACTACTTCCATGCTCCAGAATAATAACAACAGCAACAGGTTCCCATTTAGCTCATCAGTTGTTACAAATACCCCACCACCTTCGGCGCCTCCACCTGCAAAACAACCACCTTTTGAAACCCTTAATTCTCCTTACTCTGGTGGAGATGGGTCTTCTGGGATTAGGGCGTCTGGATTTGGCATTGACCCTAACTCTTCACAAAAGAAGAAAAGGGGTAGACCTAGAAAGTACTCTCCTGATGGTGGGGGTGGTAACATTGCTTTAGGGTTGGCTCCTACCCCTATGTCCACTTCATTTGCTGTTAGTGGTGGTGGTGGAGGTAGTGGCGGGGGCGGTGGAGGCGGCCAAGGGGACTCCGGTGGGACCCCTGCATCCCCGGACAATGCCTCCAAACGAAATCGTGGACGGCCCCCTGGTTCTAGCAAGAAGCAATTGGATGCATTAGGTAACTGTGGGGTTGGTTTTACGCCACACGTTATCTTGGTGAACGCCGGGGAGGACATTTCAGAAAAGATCTTGGCCTTTTCTAAGGAGGGACCACGGACGGTTTGCGTTCTTTCTGCAAATGGTTCCATCTGCAATGTGAGCCTTCGCCAACCTGCTATGTCTGGCGGTGTTGTGAATTATGAGGGACGATTTGAGATTATTTCTTTATCAGGCTCATTCCTGTTCTCAGAAAATAATGGTGGCCAAGTCAGAACAGGTGGCTTGAGTGTGTCATTATCAGGGTCAGATGGTCGAGTTTTAGGCGGTGGTGTTGCTGGAATGCTGATGGCAGCAACTCCTGTTCAGATTATCGTGGGCAGCTTCATCGCGGATGGAAAAAAGTCGAAATATATGCCTTCAGTACCTCAGTCTCATATGTTGAGCTTTGCTGCGCCACCACTACCAGCCGCTGATAGTCCTCCCTCCCAGGAGATCTCAAGTGAAGGGTCTGAAGAGAATGGTAGTAACCATATTGACCGGAACATGGGTTCTTACAACAATTCTAACCATCCCATTCATAACATGCAAATGTATACACCCATGAGCTGGCCTAACTCTGGTTCAAAGATGCTTCCAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61662.p1 GENE.R_Transcript_61662~~R_Transcript_61662.p1 ORF type:5prime_partial len:441 (+),score=100.45,DUF296|PF03479.11|4.8e-28 R_Transcript_61662:3-1325(+)
RGPSAPPPPHHQQQSHHHHHHHHHQQQQHQHQHHHHHQQQQHHHHQPSPSSMSMMIQHPTYPTPASHNIPNSSTPQMITPNSSAQTTSMLQNNNNSNRFPFSSSVVTNTPPPSAPPPAKQPPFETLNSPYSGGDGSSGIRASGFGIDPNSSQKKKRGRPRKYSPDGGGGNIALGLAPTPMSTSFAVSGGGGGSGGGGGGGQGDSGGTPASPDNASKRNRGRPPGSSKKQLDALGNCGVGFTPHVILVNAGEDISEKILAFSKEGPRTVCVLSANGSICNVSLRQPAMSGGVVNYEGRFEIISLSGSFLFSENNGGQVRTGGLSVSLSGSDGRVLGGGVAGMLMAATPVQIIVGSFIADGKKSKYMPSVPQSHMLSFAAPPLPAADSPPSQEISSEGSEENGSNHIDRNMGSYNNSNHPIHNMQMYTPMSWPNSGSKMLPN*

Click here to download the sequence:
Link to NCBI Protein BLAST