Transcript Information: R_Transcript_61892.p1


Annotated TAIR IDAT2G21440.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9173712-9179065 | Reverse length=1003
E-Value7.1E-247
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.983773918053
Replicate 214.081100975706
Replicate 314.063141389877
Condition 2: 8 Hour
Replicate 115.105707728649
Replicate 215.908488076067
Replicate 315.713334566902
Condition 3: 24 Hour
Replicate 118.274871425038
Replicate 216.744440331851
Replicate 317.292375643181


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_61892.p1 GENE.R_Transcript_61892~~R_Transcript_61892.p1 ORF type:5prime_partial len:1005 (+),score=270.20,RRM_1|PF00076.18|2.1e-18,RRM_1|PF00076.18|90,RRM_1|PF00076.18|5.3e-16,RRM_1|PF00076.18|8.2e-13,RRM_1|PF00076.18|1.6e-05,RRM_6|PF14259.2|1.1e-09,RRM_6|PF14259.2|2.1e-09,RRM_6|PF14259.2|2.7e-08,RRM_6|PF14259.2|3.8e+02,RRM_6|PF14259.2|0.019,RRM_5|PF13893.2|0.00027,RRM_5|PF13893.2|2.5e+03,RRM_5|PF13893.2|2.3e-06,RRM_5|PF13893.2|0.017,RRM_5|PF13893.2|0.55 R_Transcript_61892:3-3017(+)
GATCTCAAACTCTCGGGCAGCTCTCATCGCCCTTTCTCTTTCTACCACTCTTCCCCTGTTTCTCTCCTGAAGCCGTGCACTAAACCCTTCACTCCACCACCCTCTGTACCTCTTTCTTTCTCCCTCTTCCCGTCCAAGAAGATGGGCAAGAAGAACAAATCAAAGGAAGGCAACAAAACCGAGCATTGCCCAGCAACTGTTTTTGTCTCCAATCTGCCCTACACTTTCACCAACTCCCAGCTTGAAGAAACCTTCAGCGATGTTGGCCCTATACGACGTTGTTTCATGGTCACCAAGAAAGGCTCAACTGAACACAGGGGCTTTGGTTTTGTTCAATTTGCTACTGCGGAGGATGCTGATCGTTCCATTGAAATGAAAAATGGCTCATCTGTTGGAGGACGGAAAGTAGTGGTGAAACATGCTGCACATCGTGCTCCTTTAGAGCAGCGTCGACCGAAGCCAAATCAAGCTGATTCAAATGAAATTGATAAGACAACAGATGAGAAGGAGGGGGCCCCACAACCTGCTCCTGTAAAACATGAAAAGCCGCCAACTGAGCAGAAAATTGTAGGTAAATCCATTCAGCCTGTAAAGAGATCAAAGAAACCTAGTATTGGTGTAGCTGAAGGCAGTGCTTCAGAAAAACAAAGGGTGGCAAGGACTGTGATATTTGGAGGGCTGTTGAACTCTGAAATGGCAGATGAGGTCCTCCGTCGCGCCAAAGAGGTTGATGGAGTCTGTTCTGTAACATACCCACTTCCAAAACAAGAGCTAGAGCACCATGGTCTTGCCCAAGATGGATGCAGAATGGAAGCTGCAGCTGTACTTTATGCTAGTATTAGATCTGCACGTGCTTCTGTTGCTGCCCTGCACCAAAAAGAAGTGAATGGAGGATCAGTGTGGGCACGCCAGCTTGGTGGGGAGGGATCCAAGACTCAGAAGTGGAAACTTATACTCCGCAACCTTCCTTTTAAGGCAAAAATCAACGAGATAAAAGAAAAATTCACAGCGGCAGGTTTTGTTTGGGATGTATTTATTCCCAAGAATTCTGAGACAGGGATGTCCAAGGGGTTTGCGTTTGTTAAGTTCACTAGCAAGCAAGATGCAGAAAATGCTATCCTTAAGTTCAACGGGAAAAAATTTGGTTCGAGGACCATTGCTGTTGACTGGGCTGTTCCTAAGAAAATATATACAACCGGTGCTCATTCTGCAGTGGAGGATGTAGAGCATGAGGATGAAGATGCAGATGGTGATGATGATGACAATGCATCAGAGGATGATGGTTTGGATCTTGAGAAAAAGTCTGAAGCCTCAGATAAAGATGGCTTTGAGTCAGATTTTGCTGATGAGGAGGAAAAGGAAGATGTCTCTGCTGAAGAAAATTTTGATGAAGAATTAGAAATAGCACGAAGGGTCCTTCAAAATGTTATTACATCCTCTGTGAAAGAAGCATCATCCTTGAGCAAAGGTTCCAGCCTTGATAGGAATGGCACAAATTCTGATAAGTCAGTCGATGTTTCTAAGAAAGAAACGACTGAATCTGCGATGCTAGCGACACAGATGAAGGTGGAAAGCGCCCAAGAAGAAAAACAGAATGAATCTCTATCTAAAAACGCTGAAAATGATCTGCCAAGAACAGTTTTTATAAGCAATCTTCCTTTTGATTTGGACAATGAAGAAGTGAAGCAACGGTTTGCTAGTTTTGGAGAAGTGCAATCATTTTTTCCTGTGCTTCATCCAATCACCAAACGACCAAGAGGAACTGGATTCCTTAAGTTTGCTACTCCTAGTGCAGCAGATGCTGCAGTTTCTGCTGCAAATGCTGCACCTGGTCTGGGAATTTTTCTAAAAGGAAGGCTATTGAAGGTATTAAAGGCTTTGGACAAGAAATCAGCTCATGATAAAGCAGTTGAGAAGTCCAAAAATGAGAACCAAGACCAGCGTAATCTCTATCTAGCAAAGGAGGGTCTGATTGTTGAGGGAACTCCAGCTGCAGAAGGTGTTTCATCAGATGATTTGGAAAAGCGTCAAATGTTGCACCAGAAAAAGATGACAAAACTTCAGTCACCAAATTTTCATGTTTCAAGAACAAGACTAGTCATATACAATTTGCCAAAGTCAATGACTGAAAAAGAACTCAGACAGCTCTGTGTTGATGCGGTTACCTCAAAAGCGTCCAAGCAAAAGCCTTTGATACGACAGATAAAGTTTTTGAATGATGTTAAGAAAGGGAAGGTTAAAAGTCATTCTCGCGGAGTTGCTTTTGTTGAGTTCGCAGAACATCAACATGCCATTGTGGCATTAAGGGTGCTTAACAACAATCCGGAAACTTTTGGCCCTCAGCATCGTCCAATTGTGGAATTCGCTATCGATAATATTCAGACACTGCGTAAGAGAAGCTTAAAACGCAATGATCAGCAGCTGAAGACAGAAGATAATCTTGATGATGTGCAACAAAATGATGATACCTCAAGTTCACCGACCAAATCAAACAAAGAGAAGTTCAGAAAAAGGAAATCACGGGAAGATTATAGATCAACGGAAGGTCAGGAGCCTGGCAGTGAAACCATGAAAGGAAATAGAACTTCTGCTGGAGCTTCCACTAAAGAGAATCAAGGAAATAAGAAGGAAAAGTGGACTGCAGCGCGAGAAGGAAATGACCAAACAACAGGGAATCGGAATAAGGTAAAGAAGAACCGAAAAGAGAAGAAGCTAAACCAAGACAAATCATCTCAAGACAAAAATGTAAGTTACAATGATGGTAAGTTAAAACCTTTAAAGGAAACAGATAAGCATCCGAAAAAGAGGAAGGCTAATGATCCTTCAGCTGAGGGGCAGAGTCCTAAGAAAAGAAGACGGAATAGGAACAAAGAACCTGTAGGCAAAGATGCTGTGGATAAGCTGGACATACTGATTGCACAATATCGATCCAAGTTTTCACAGAAGAAATCAGATAAATCTGATGGTGAAAAGCAAGGTTCTAAGCAGCAGATTAGAAGATGGTTCCAGACGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_61892.p1 GENE.R_Transcript_61892~~R_Transcript_61892.p1 ORF type:5prime_partial len:1005 (+),score=270.20,RRM_1|PF00076.18|2.1e-18,RRM_1|PF00076.18|90,RRM_1|PF00076.18|5.3e-16,RRM_1|PF00076.18|8.2e-13,RRM_1|PF00076.18|1.6e-05,RRM_6|PF14259.2|1.1e-09,RRM_6|PF14259.2|2.1e-09,RRM_6|PF14259.2|2.7e-08,RRM_6|PF14259.2|3.8e+02,RRM_6|PF14259.2|0.019,RRM_5|PF13893.2|0.00027,RRM_5|PF13893.2|2.5e+03,RRM_5|PF13893.2|2.3e-06,RRM_5|PF13893.2|0.017,RRM_5|PF13893.2|0.55 R_Transcript_61892:3-3017(+)
DLKLSGSSHRPFSFYHSSPVSLLKPCTKPFTPPPSVPLSFSLFPSKKMGKKNKSKEGNKTEHCPATVFVSNLPYTFTNSQLEETFSDVGPIRRCFMVTKKGSTEHRGFGFVQFATAEDADRSIEMKNGSSVGGRKVVVKHAAHRAPLEQRRPKPNQADSNEIDKTTDEKEGAPQPAPVKHEKPPTEQKIVGKSIQPVKRSKKPSIGVAEGSASEKQRVARTVIFGGLLNSEMADEVLRRAKEVDGVCSVTYPLPKQELEHHGLAQDGCRMEAAAVLYASIRSARASVAALHQKEVNGGSVWARQLGGEGSKTQKWKLILRNLPFKAKINEIKEKFTAAGFVWDVFIPKNSETGMSKGFAFVKFTSKQDAENAILKFNGKKFGSRTIAVDWAVPKKIYTTGAHSAVEDVEHEDEDADGDDDDNASEDDGLDLEKKSEASDKDGFESDFADEEEKEDVSAEENFDEELEIARRVLQNVITSSVKEASSLSKGSSLDRNGTNSDKSVDVSKKETTESAMLATQMKVESAQEEKQNESLSKNAENDLPRTVFISNLPFDLDNEEVKQRFASFGEVQSFFPVLHPITKRPRGTGFLKFATPSAADAAVSAANAAPGLGIFLKGRLLKVLKALDKKSAHDKAVEKSKNENQDQRNLYLAKEGLIVEGTPAAEGVSSDDLEKRQMLHQKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKELRQLCVDAVTSKASKQKPLIRQIKFLNDVKKGKVKSHSRGVAFVEFAEHQHAIVALRVLNNNPETFGPQHRPIVEFAIDNIQTLRKRSLKRNDQQLKTEDNLDDVQQNDDTSSSPTKSNKEKFRKRKSREDYRSTEGQEPGSETMKGNRTSAGASTKENQGNKKEKWTAAREGNDQTTGNRNKVKKNRKEKKLNQDKSSQDKNVSYNDGKLKPLKETDKHPKKRKANDPSAEGQSPKKRRRNRNKEPVGKDAVDKLDILIAQYRSKFSQKKSDKSDGEKQGSKQQIRRWFQT*

Click here to download the sequence:
Link to NCBI Protein BLAST