Transcript Information: R_Transcript_62000.p1


Annotated TAIR IDAT1G74040.1
Annotated Gene Name2-isopropylmalate synthase 1
Annotated Gene Symbol(s)IMS1, MAML-3, IPMS2
Annotation TypeOrtholog
Chromosome Positionchr1:27842258-27845566 | Forward length=631
E-Value2.4E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8076069088338
Replicate 23.476806735602
Replicate 33.5468496923075
Condition 2: 8 Hour
Replicate 12.4222576076845
Replicate 21.0579341946367
Replicate 30.66360726999264
Condition 3: 24 Hour
Replicate 12.0242367663137
Replicate 22.3241025497598
Replicate 32.4005869656597


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62000.p1 GENE.R_Transcript_62000~~R_Transcript_62000.p1 ORF type:complete len:465 (+),score=94.92,HMGL-like|PF00682.15|1.3e-86 R_Transcript_62000:351-1745(+)
ATGGCTTCAATGACCTTCTCCACCTCTATACATACCCAAACAACCAAAACCAAGGACAACAAAACCACCATATCCCTAAAACCAATTTCCCATCACTCAATCAACAAGAAACCCACCATTAAAATGATCACATCACGACTCCAGGCTCGACCCATTTACATCCCTAACAGGATCTCGGACAAGTCCTATGTCCGAGTCCTTGACACGACCCTACGTGATGGGGAACAGGCAGCAGGGGTGGCCCTAACAGGGCAAGAGAAGCTTGAGATAGCTAAACAGCTAGCCAAGCTTGGGGTTGATGTCATTGAGGCCGGGTTTCCATCTTCCTCTAGGGATGAATTTGAGGCAGTTAAGCAAATTGCAATGGAAGTTGGGAATAATGTGAATGAAGATGGTTATGTTCCAGTGATTAGTGGGCTAGCTAGGTGTGTTAACAAGGATGTTGAGGCTACTTGGGAAGCTGTGAAATTTGCTAAGTTTGCTAGGGTGACTTTGGTCATTCCTACTAGTAAAGTTCATATGCAATACAAGTTGAAGAAAAGTGAAGAGGATGTCATGAGGATTGTGAAAAATGTGTTGGCTTATGCAAGGAGCTTAGGGGTTCAAGATATTCAGCTCATTGCTGAAGATGCTGGCAGGGCGGATAGAAAATTTCTTTACGAATTGGTGGAAGAAGCGATCAAAGGAGGAACAACAACAATAGATCTAGCGGACACAGTAGGCTACAGATATCCTCATGAATGGGGCCAATTCTTCCAAGAGATCAAGCTAAACATTCCTGGTATTGATAATGTTGTCTTGGCTACACATTGCCATGACGATCTTGGCCTTGCCACTGCCAATACATTAGCAGCTGTGTTTGCAGGTGCACGACAAGTTGAGGTGACCGTTAATGGCATCGGAGAAAGGGCAGGCAATGCTTGTTTGGAAGAAGTTGTGATGGCACTAAAATGCAGAGCTGATCTTGGAGGACTTTACACTGGAATCGATGCAAAACAAATTTACCCAACCAGCAAGATGGTGGAAGAATTGAGTGGGCTACATATTCAACCCAACAAATCCATCGTGGGAGCAAATGCTTTTGTCCATGCAAGTGGAATTCATCAGGATGGGGTGCTTAAACATAGGGGTACATATGAAATAATGGCACCGGAAGATATTGGAAGACCAAGATCTAATAATGATGGTATTGTCCTTGGGAAACTCAGTGGCCGCCATGCTCTGCAATCTAAGCTTGATGAGGTAAACCAGATCTTGGCTACCATTTGGATGATGAGAAATTTAATTACACCTTTTGGCGTTTTAAAGCCCTTGCTGAGAAGAAGAATCTCTCTGACAGCGACATCAAATTGCTTCTGTTCGAAGAGGAAATTGCAGTTCCAAGGGCATAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62000.p1 GENE.R_Transcript_62000~~R_Transcript_62000.p1 ORF type:complete len:465 (+),score=94.92,HMGL-like|PF00682.15|1.3e-86 R_Transcript_62000:351-1745(+)
MASMTFSTSIHTQTTKTKDNKTTISLKPISHHSINKKPTIKMITSRLQARPIYIPNRISDKSYVRVLDTTLRDGEQAAGVALTGQEKLEIAKQLAKLGVDVIEAGFPSSSRDEFEAVKQIAMEVGNNVNEDGYVPVISGLARCVNKDVEATWEAVKFAKFARVTLVIPTSKVHMQYKLKKSEEDVMRIVKNVLAYARSLGVQDIQLIAEDAGRADRKFLYELVEEAIKGGTTTIDLADTVGYRYPHEWGQFFQEIKLNIPGIDNVVLATHCHDDLGLATANTLAAVFAGARQVEVTVNGIGERAGNACLEEVVMALKCRADLGGLYTGIDAKQIYPTSKMVEELSGLHIQPNKSIVGANAFVHASGIHQDGVLKHRGTYEIMAPEDIGRPRSNNDGIVLGKLSGRHALQSKLDEVNQILATIWMMRNLITPFGVLKPLLRRRISLTATSNCFCSKRKLQFQGHR*

Click here to download the sequence:
Link to NCBI Protein BLAST