Transcript Information: R_Transcript_62002.p1


Annotated TAIR IDAT1G74040.1
Annotated Gene Name2-isopropylmalate synthase 1
Annotated Gene Symbol(s)IMS1, MAML-3, IPMS2
Annotation TypeOrtholog
Chromosome Positionchr1:27842258-27845566 | Forward length=631
E-Value2.8E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5726497147143
Replicate 27.9248509163468
Replicate 39.2918870509339
Condition 2: 8 Hour
Replicate 15.4176967996074
Replicate 27.4212905026061
Replicate 37.5598898896189
Condition 3: 24 Hour
Replicate 17.1712022576776
Replicate 26.7935938448199
Replicate 37.3117278129766


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62002.p1 GENE.R_Transcript_62002~~R_Transcript_62002.p1 ORF type:complete len:461 (+),score=104.32,HMGL-like|PF00682.15|1.2e-86 R_Transcript_62002:351-1733(+)
ATGGCTTCAATGACCTTCTCCACCTCTATACATACCCAAACAACCAAAACCAAGGACAACAAAACCACCATATCCCTAAAACCAATTTCCCATCACTCAATCAACAAGAAACCCACCATTAAAATGATCACATCACGACTCCAGGCTCGACCCATTTACATCCCTAACAGGATCTCGGACAAGTCCTATGTCCGAGTCCTTGACACGACCCTACGTGATGGGGAACAGGCAGCAGGGGTGGCCCTAACAGGGCAAGAGAAGCTTGAGATAGCTAAACAGCTAGCCAAGCTTGGGGTTGATGTCATTGAGGCCGGGTTTCCATCTTCCTCTAGGGATGAATTTGAGGCAGTTAAGCAAATTGCAATGGAAGTTGGGAATAATGTGAATGAAGATGGTTATGTTCCAGTGATTAGTGGGCTAGCTAGGTGTGTTAACAAGGATGTTGAGGCTACTTGGGAAGCTGTGAAATTTGCTAAGTTTGCTAGGGTGACTTTGGTCATTCCTACTAGTAAAGTTCATATGCAATACAAGTTGAAGAAAAGTGAAGAGGATGTCATGAGGATTGTGAAAAATGTGTTGGCTTATGCAAGGAGCTTAGGGGTTCAAGATATTCAGCTCATTGCTGAAGATGCTGGCAGGGCGGATAGAAAATTTCTTTACGAATTGGTGGAAGAAGCGATCAAAGGAGGAACAACAACAATAGATCTAGCGGACACAGTAGGCTACAGATATCCTCATGAATGGGGCCAATTCTTCCAAGAGATCAAGCTAAACATTCCTGGTATTGATAATGTTGTCTTGGCTACACATTGCCATGACGATCTTGGCCTTGCCACTGCCAATACATTAGCAGCTGTGTTTGCAGGTGCACGACAAGTTGAGGTGACCGTTAATGGCATCGGAGAAAGGGCAGGCAATGCTTGTTTGGAAGAAGTTGTGATGGCACTAAAATGCAGAGCTGATCTTGGAGGACTTTACACTGGAATCGATGCAAAACAAATTTACCCAACCAGCAAGATGGTGGAAGAATTGAGTGGGCTACATATTCAACCCAACAAATCCATCGTGGGAGCAAATGCTTTTGTCCATGCAAGTGGAATTCATCAGGATGGGGTGCTTAAACATAGGGGTACATATGAAATAATGGCACCGGAAGATATTGGAAGACCAAGATCTAATAATGATGGTATTGTCCTTGGGAAACTCAGTGGCCGCCATGCTCTGCAATCTAAGCTTCATGAGCTTGGCTACCATTTGGACGATGAGAAATTTAATTACGCCTTTTGGCGTTTCAAAGCCCTTGCTGAGAAGAAGAAGAATCTCTCTGATAGCGACATCAAATTGCTTCTGTTCGAAGAGGAAATTGCAGTTCCAAGGGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62002.p1 GENE.R_Transcript_62002~~R_Transcript_62002.p1 ORF type:complete len:461 (+),score=104.32,HMGL-like|PF00682.15|1.2e-86 R_Transcript_62002:351-1733(+)
MASMTFSTSIHTQTTKTKDNKTTISLKPISHHSINKKPTIKMITSRLQARPIYIPNRISDKSYVRVLDTTLRDGEQAAGVALTGQEKLEIAKQLAKLGVDVIEAGFPSSSRDEFEAVKQIAMEVGNNVNEDGYVPVISGLARCVNKDVEATWEAVKFAKFARVTLVIPTSKVHMQYKLKKSEEDVMRIVKNVLAYARSLGVQDIQLIAEDAGRADRKFLYELVEEAIKGGTTTIDLADTVGYRYPHEWGQFFQEIKLNIPGIDNVVLATHCHDDLGLATANTLAAVFAGARQVEVTVNGIGERAGNACLEEVVMALKCRADLGGLYTGIDAKQIYPTSKMVEELSGLHIQPNKSIVGANAFVHASGIHQDGVLKHRGTYEIMAPEDIGRPRSNNDGIVLGKLSGRHALQSKLHELGYHLDDEKFNYAFWRFKALAEKKKNLSDSDIKLLLFEEEIAVPRA*

Click here to download the sequence:
Link to NCBI Protein BLAST