Transcript Information: R_Transcript_62173.p1


Annotated TAIR IDAT5G60250.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24252226-24254710 | Forward length=655
E-Value3E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7900666434217
Replicate 23.1738593652544
Replicate 33.9573101495014
Condition 2: 8 Hour
Replicate 13.009890375575
Replicate 24.6430402494156
Replicate 35.005261400306
Condition 3: 24 Hour
Replicate 13.3178226392197
Replicate 22.7111115579779
Replicate 33.8903395373721


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62173.p1 GENE.R_Transcript_62173~~R_Transcript_62173.p1 ORF type:5prime_partial len:602 (+),score=76.52,RVT_3|PF13456.2|2.1e-15,IBR|PF01485.17|1.9e+03,IBR|PF01485.17|6.3e+02,IBR|PF01485.17|1.8e-12,IBR|PF01485.17|0.24 R_Transcript_62173:1-1806(+)
TCAATAACAATAGTAAAATCCAGTAGAAAAAAGGAAGTTATTTTGTCATCCTTTTTTTGGGATTCCTTTTTTTTTTTTTTTTTTTTGCGGTTTAGATTAATTATCTCTTTGCAGCTCCCCCAAAATTTCATAAATGTTGCCCAGGTATTAAACAAAACCCATCCAAATAGCAGTGTTCGACGGAACAACTATCTTAATAGCAATTTCTTTGCCTACAAAAGAAATAAATCCTCTGGATTTTTCTTTCTCTCTCTTTCCATTCCTCAAGCAAAAATGGCGGCAACTTCACACAGCGACGAAGTGAAAGCTATCACAGAGCAAAGAGCAGAACTAATGAACGCCAAAACCCTAGAATCAGACCTAGACATGGCATTTCATCTCCAATTGGAGGAAGCCATGGCTGCTTCTCTCTCTCTCCTCCCCTCTTCTTCTTCTTCACCCCCTAAACCATCTCTAAACAACAACAAAAACGATCGCGATGATCGTGACGGATCGTTCAATACCACCGATTTTCAGAGCAAGGAGCTCGATAAGTTGGAGCAAGAAAGGCGAGACCGTGAATTGTGCGAAATTGAGGCGAAGCGATTGAGAGAAGATCTTTTTCGCCGGATTCACGATCAGAAACTTGCGATTGATATTCAACGTTTGCCTGATGATGATTGGGAGGAGTTTGGGGATGAGTTTGAGCGGCCTTTTGGTGAAGGCTCTTCCACTTCTGTACCTAATGTTAATTTCAGGTTGTATTTTAAAGGGTTGGTTAGTGTAGAAAGAGTTGAAGGTTCAAAGGTTACTCTGACTGGAATAGGAGTTGCAATTTGCAATCCGAAAGGTAATGTATTATTTAGTTTGAGCAAGCCATTGGTGGGGAGCGGGACGAGTCGTCAAGTAACTGAGATAAAGGCTTTGATTGAAGGCCTTGAAACAGCGATGGCTCTGGATTTAAAGCGCGTCACATTGCTTTGTGATTATCCTCCTGTTTACCAGTATGTTAGGCGAGTATGGCAACCAAAGTCGAAGAAGGTTGAGAAGCTAATGGCAAAAGTTGAACATCTTCAAAAACAATTTACTTACTGTCAGCCTTCTCTTGTTCCACGAAATAATATGCAGCTTGCATTTAAGCTTGCCAGAGATTCTATTGTCTCTCAGTTGTCTAGGCCTGCCGAGTCTAGCCATGTTAAGGATTTGAAGGAGACTTGTGTGATCTGCCTGGAAGAGACTGACCAGGATAAGATGTTCGTCATCGACAGTTGTCTGCATAGATACTGTTTCACTTGCATGAGGCAGCATGTCGAAGCAAAGCTACATAGTGGAATGTTACCCAAATGTCCTCATGAAAATTGTAAATCTGAGCTCAAGGTCATTAGCTGTGAGAAATTCTTGACACCGAAGCTAATTGAAATCCTGAAACAACGGATTAGAGAAGCATCTATTCCTGTTACGGAAAAAGTTTATTGCACATATCCTAGGTGCTCTGCGTTGATGTCAAAAAGTGAAATTTCTGACTTTGCGAGGATAGAAAAAGTCAAGGAAAGAATGTTTGGAGCGAGGAAATGTATGAAGTGTTATGGCCTTTTTTGTGTCAACTGTAAAGCCCCATGGCATAAAAACATGACTTGCTTAGAGTATAAGAGGTCAAATCCATATCCACGGCTTGAAGAACTGAAGCTTCAGTCACTTGCAACAAGGAATTCGTGGTGCCAATGTGTGAAGTGCAAGCATATGATTGAACTTGTCGAAGGTTGCTACCACATGACTTGCAGGAAACCAAACAATTATGCTAGGGCCTGCGAAATGTCCTTATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62173.p1 GENE.R_Transcript_62173~~R_Transcript_62173.p1 ORF type:5prime_partial len:602 (+),score=76.52,RVT_3|PF13456.2|2.1e-15,IBR|PF01485.17|1.9e+03,IBR|PF01485.17|6.3e+02,IBR|PF01485.17|1.8e-12,IBR|PF01485.17|0.24 R_Transcript_62173:1-1806(+)
SITIVKSSRKKEVILSSFFWDSFFFFFFLRFRLIISLQLPQNFINVAQVLNKTHPNSSVRRNNYLNSNFFAYKRNKSSGFFFLSLSIPQAKMAATSHSDEVKAITEQRAELMNAKTLESDLDMAFHLQLEEAMAASLSLLPSSSSSPPKPSLNNNKNDRDDRDGSFNTTDFQSKELDKLEQERRDRELCEIEAKRLREDLFRRIHDQKLAIDIQRLPDDDWEEFGDEFERPFGEGSSTSVPNVNFRLYFKGLVSVERVEGSKVTLTGIGVAICNPKGNVLFSLSKPLVGSGTSRQVTEIKALIEGLETAMALDLKRVTLLCDYPPVYQYVRRVWQPKSKKVEKLMAKVEHLQKQFTYCQPSLVPRNNMQLAFKLARDSIVSQLSRPAESSHVKDLKETCVICLEETDQDKMFVIDSCLHRYCFTCMRQHVEAKLHSGMLPKCPHENCKSELKVISCEKFLTPKLIEILKQRIREASIPVTEKVYCTYPRCSALMSKSEISDFARIEKVKERMFGARKCMKCYGLFCVNCKAPWHKNMTCLEYKRSNPYPRLEELKLQSLATRNSWCQCVKCKHMIELVEGCYHMTCRKPNNYARACEMSLS*

Click here to download the sequence:
Link to NCBI Protein BLAST