Transcript Information: R_Transcript_62290.p3


Annotated TAIR IDAT5G36300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14320668-14322398 | Forward length=284
E-Value2.5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1729715422284
Replicate 20.99982382934753
Replicate 33.5450903422617
Condition 2: 8 Hour
Replicate 10.58299678445822
Replicate 20.79860292289948
Replicate 31.0804530131183
Condition 3: 24 Hour
Replicate 11.9131506023087
Replicate 21.8379382408814
Replicate 30.52113582587851


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62290.p3 GENE.R_Transcript_62290~~R_Transcript_62290.p3 ORF type:complete len:84 (+),score=11.45,PPR_2|PF13041.2|0.00042,PPR_2|PF13041.2|8.7e-14,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|0.0002,PPR|PF01535.16|19,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|0.31,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.00099,PPR_3|PF13812.2|0.53 R_Transcript_62290:611-862(+)
ATGCTTCAACTATTCTTTTCTGCACAGGGATTATGTGAAGAGACTGTTAAGGTACTCCAGATCATGGAAGCAGAAGGTATCGAACCAAACCTTATAATGCTCAATGTCTTGATCAATGCATTTGGCACCGCGGGGAGACATCTCGAAGCACTTTCTGTATTCAACTATATCATAGAAAGTGGCATTACTCCAGATGTTGTTACATACACCACTCTCATGAAAGCTTTTATCAGGGCAAAGAAATTTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62290.p3 GENE.R_Transcript_62290~~R_Transcript_62290.p3 ORF type:complete len:84 (+),score=11.45,PPR_2|PF13041.2|0.00042,PPR_2|PF13041.2|8.7e-14,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|0.0002,PPR|PF01535.16|19,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|0.31,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.00099,PPR_3|PF13812.2|0.53 R_Transcript_62290:611-862(+)
MLQLFFSAQGLCEETVKVLQIMEAEGIEPNLIMLNVLINAFGTAGRHLEALSVFNYIIESGITPDVVTYTTLMKAFIRAKKFS*

Click here to download the sequence:
Link to NCBI Protein BLAST