Transcript Information: R_Transcript_62318.p2


Annotated TAIR IDAT1G15710.1
Annotated Gene Nameprephenate dehydrogenase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5404505-5405581 | Forward length=358
E-Value1.2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.892300877434
Replicate 27.8069384919723
Replicate 313.225599073991
Condition 2: 8 Hour
Replicate 18.7085986186507
Replicate 211.825962913699
Replicate 315.720217049989
Condition 3: 24 Hour
Replicate 113.997369764697
Replicate 210.441866218403
Replicate 315.265789412109


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62318.p2 GENE.R_Transcript_62318~~R_Transcript_62318.p2 ORF type:5prime_partial len:433 (+),score=22.77,PDH|PF02153.13|4.1e-15,F420_oxidored|PF03807.13|2.2e-10,NAD_binding_2|PF03446.11|2.6e-06,2-Hacid_dh_C|PF02826.15|4.6e-06 R_Transcript_62318:2-1300(+)
AACTACTCACTCAAATACTCATCCCCTTTTCTTTTTGTCAATTTCTTTGAGTTCCAAATAATTACAAAATTTTCAGCTTCTTTAACCAAAATTCCGCACGCAATGTTTTCTCTCTCCTCAACCGCCGTCAAAACCACGCCATCACCGTTACCGTCACCTTCACCGTCGCCGTTGCCGTCTCCGTCGACGTCACCGGTGGCGGTTTCTCTCTCCTCTCACTCACTCATCTCCTCAACACTCCCTTCTCTTTCCTCTCTATCTATCAAATTCAACCGAAGAAAACTCAAATCCAAAACCATATCTATACGTAACATCGACGCAGCTCAACCATACGATTACGAATCCAAACTTGCCTCCATTAATGGAAACTACACGAAGCTGAAGATCGCTATCATCGGGTTCGGAAACTACGGCCAATTCCTCGCGAAAACCCTAGTTTCTCAAGGCCACAAAGTTCTCGCTCATTCTCGAACGGATTACTCACGAATCGCATCGAAACTCGGAGTTTCGTTCTTCTCAGACCCTCACGATCTTTGCGAAGAACATCCCGAGGTAATTCTCTTGTGTACTTCGATCCTTTCTACCGAACCTGTTCTTAAATCGCTACCATTACAGAGGCTCAAAAGATCGACGCTATTTGTCGACGTTTTATCGGTAAAGGAATTTCCTCGCTCTTTGTTTCTTCAAATTTTGCCACCTGATTTTGATATTCTGTGTACTCATCCTATGTTTGGGCCTGAATCTGGTAAAAACGGTTGGTCTGGATTGCCTTTTGTTTATGATAAGGTTAGGATTGGTCATGGTGAGAGTAGAATTAACAGGTGTGAGGCTTTTCTGGATGTGTTTAGGAGGGAAGGGTGTAGGGTTGAGGAAATGACTTGTGCTGAACATGATAAGTATGCGGCCGGTTCGCAGTTTATTACGCATTTCGTAGGGAGGATTCTGGAGAAACTTGATTTGGAGGATACTCCTATTAATACTAAAGGTTATGAGAGTTTGTTGAATTTGGTCGATAACACGTCAAAAGATAGTTTCGAGCTGTTCTATGGGTTGTTCTTGTATAATAAGAACGCTATGGAGCAGCTCGAGCGGCTGGATTTGGCATTTGAGCTGGTTAAGCAACAGTTGTTCGGGCATTTGCATGGGTTGTTGAGGAAGCAGTTGTTTGGGTGTACCGAGATGGAGGAGCGGTCTGTAAAGGATAAGGAGGCTAAGTTTCTTTCTGATGTGTCCGTGAATGGGTCGCATAATGGTTCTGCTTCAGCTCCGTCGAGCAATTCAAGTATCGAGATTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62318.p2 GENE.R_Transcript_62318~~R_Transcript_62318.p2 ORF type:5prime_partial len:433 (+),score=22.77,PDH|PF02153.13|4.1e-15,F420_oxidored|PF03807.13|2.2e-10,NAD_binding_2|PF03446.11|2.6e-06,2-Hacid_dh_C|PF02826.15|4.6e-06 R_Transcript_62318:2-1300(+)
NYSLKYSSPFLFVNFFEFQIITKFSASLTKIPHAMFSLSSTAVKTTPSPLPSPSPSPLPSPSTSPVAVSLSSHSLISSTLPSLSSLSIKFNRRKLKSKTISIRNIDAAQPYDYESKLASINGNYTKLKIAIIGFGNYGQFLAKTLVSQGHKVLAHSRTDYSRIASKLGVSFFSDPHDLCEEHPEVILLCTSILSTEPVLKSLPLQRLKRSTLFVDVLSVKEFPRSLFLQILPPDFDILCTHPMFGPESGKNGWSGLPFVYDKVRIGHGESRINRCEAFLDVFRREGCRVEEMTCAEHDKYAAGSQFITHFVGRILEKLDLEDTPINTKGYESLLNLVDNTSKDSFELFYGLFLYNKNAMEQLERLDLAFELVKQQLFGHLHGLLRKQLFGCTEMEERSVKDKEAKFLSDVSVNGSHNGSASAPSSNSSIEIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST