Transcript Information: R_Transcript_62353.p1


Annotated TAIR IDAT4G03430.1
Annotated Gene Namepre-mRNA splicing factor-related
Annotated Gene Symbol(s)STA1, EMB2770
Annotation TypeOrtholog
Chromosome Positionchr4:1517411-1520500 | Reverse length=1029
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.554048151449
Replicate 214.535900288206
Replicate 318.780402196651
Condition 2: 8 Hour
Replicate 118.286911796044
Replicate 220.793225081141
Replicate 329.1450885229
Condition 3: 24 Hour
Replicate 126.087401202269
Replicate 219.521159037522
Replicate 328.387948045713


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62353.p1 GENE.R_Transcript_62353~~R_Transcript_62353.p1 ORF type:complete len:1027 (+),score=324.97,PRP1_N|PF06424.8|1.8e-55,TPR_14|PF13428.2|11,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|5.2,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|0.23,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|9.4e+03,TPR_14|PF13428.2|5.6e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|0.46,TPR_14|PF13428.2|19,TPR_14|PF13428.2|0.00042,TPR_14|PF13428.2|0.0051,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|0.35,TPR_14|PF13428.2|0.52,TPR_14|PF13428.2|3e+03,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|26,TPR_19|PF14559.2|51,TPR_19|PF14559.2|35,TPR_19|PF14559.2|8e-05,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|0.0071,TPR_19|PF14559.2|40,TPR_16|PF13432.2|19,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|5.8e+03,TPR_16|PF13432.2|93,TPR_16|PF13432.2|25,TPR_16|PF13432.2|8.4,TPR_16|PF13432.2|0.21,TPR_16|PF13432.2|24,TPR_16|PF13432.2|0.19,TPR_16|PF13432.2|19,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|1.6e+03,TPR_17|PF13431.2|0.2,TPR_17|PF13431.2|0.91,TPR_17|PF13431.2|1.1e+03,TPR_17|PF13431.2|3.1e+03,TPR_17|PF13431.2|2e+03,TPR_2|PF07719.13|7.5e+02,TPR_2|PF07719.13|5.2e+02,TPR_2|PF07719.13|6.8e+02,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.093,TPR_2|PF07719.13|6.7e+03,TPR_2|PF07719.13|29,TPR_2|PF07719.13|8.2 R_Transcript_62353:377-3457(+)
ATGGTTTACATCACAACTTTCGACAACAAAACCCTAGCCTTCAATACAAACCCTAATTCCACAACCCTAGGGGCACTCAACCACCAAATCTTTGATCGATTAGGTGTTCCTACTGACAAACAATTCTTATTACTGTCATCTTCTTTAAGAAGAGTAATCGGGGATTCAAATTGTTTAATTGCTGATTTAGGAATCAGGTCAAATTCAACCCTAACCCTACATGTCCCTTTATATGGTGGTATGCAAGCTCCTGTTCAATCTAAGAACAAGCTAGATTTCCTGAATTCAAAGCCTCCACCTAATTATGTTGCTGGGCTGGGCCGTGGGGCCACCGGGTTTACTACCCGGTCCGATATCGGTCCTGCTAGGGCGGCCCCGGACTTGCCTGACCGGTCTACCACCACCATTGGCGGGGCTGCTGGTGCTGCTGCTCCAGGAGGGGCTGTAGGGCGGGGCCGAGGGAAGGAGGAGGAGGAAGAAGAGGAAGGGGATGAAAAGGGTTATGACGAGAATCAGAAGTTTGACGAGTTTGAAGGGAATGATGTAGGGCTGTTTGCTTCAGCTGAGTATGATGAGGATGATAAGGAGGCTGATGCTGTTTGGGAGGCTATTGATAAGAGGATGGATTCTAGGAGGAAAGATAGGAGGGAGGCTAGATTGAAGGAAGAGATTGAGAAGTATAGGGCTTCGAATCCTAAGATTACGGAACAATTTGCTGATTTGAAGAGAAAGTTGCAAACTATGTCTGCTGAGGAATGGGATAGTATTCCTGAGATTGGGGATTATTCCTTGAGGAATAAGAAGAGGAGGTTTGAGAGTTTTGTGCCCGTTCCCGATACTTTGCTTGAGAAAGCTAGGCAGGAGAAAGAGCATGTTATGGCTCTTGACCCTAAGAGTAGAGCTGCTGGTGGGACTGAGACTCCTTGGGCACAAACTCCTGTTACTGACTTGACAGCTGTTGGGGAGGGCAGGGGTACTGTTATGAAACTCAAACTTGATCGGTTATCTGATTCCGTGTCTGGCCAGACAGTTGTTGATCCTAAGGGTTATTTGACTGATCTTAAGAGTATGAAGATTACTAGTGATGCTGAGATTTCTGATATCAAGAAGGCTAGGTTGTTGCTCAAGTCTGTTATACAAACCAATCCCAAGCACCCTCCTGGTTGGATTGCGGCTGCAAGGTTGGAGGAGGTTGCTGGCAAGATTCAGGTGGCCAGGCAATTGATCAACAAAGGCTGTGATGAGTGTCCTAAGAATGAGGATGTGTGGTTGGAGGCTTGTCGATTGGCAAGCCCTGATGAAGCCAAGGCTGTGCTAGCCAAGGGTGTGAAAGCCATCCCCAATTCTGTCAAGTTGTGGCTGCAGGCTGCAAAGCTGGAGCATGATGATGGCAACAAGAGTAGGGTGTTGAGGAAGGGGCTTGAACATATACCCGACTCAGTGAGGCTTTGGAAGGCAGTTGTGGAGCTTGCTAATGAGGAGGATGCCAGGCTTTTGCTTCAGAGGGCAGTGGAGTGCTGTCCCTTGCACATCGAGCTGTGGCTTGCTCTTGCCAGGCTTGAAACTTATGACATGGCAAAGAAAGTACTTAACAGGGCCAGGGAAAGGCTTCCCAAGGAGCCAGCTATTTGGATCACTGCTGCGAAGCTGGAAGAAGCTAATTCCAATACTGCAATGGTTGAGAAGATCATCGAGAGGGGTATCAGGGCCTTACAGAGAGAAGGGGTTGTTATTGACAGAGAAGCTTGGATGAAAGAAGCAGAGGCTGCTGAGCGTGCTGGGTCTGTTGTCACTTGCCAGGCCATTATCAAGCACACTGTCGGTATTGGGGTCGAAGAGGAGGATAGGAAGAGAACATGGGTTGCTGATGCTGAAGAGTGCAAGAAGAGAGGGTCTATTGAAACTGCTAGAGCTATTTATGCTCATGCTCTTTCTGTCTTCTTGACCAAGAAGAGTATTTGGCTTAAAGCTGCACAACTTGAGAAGAGTCATGGAACTAGAGAGTCTCTTGACGCCTTGTTGCGGAGGGCAGTGACATATGTGCCACAGGCTGAAGTTCTGTGGCTTATGGGTGCAAAAGAAAAGTGGCTTGCTGGTGATGTGCCTGCTGCCCGAGCCATTCTCCAAGAGGCTTATGCTGCGATCCCTAACTCTGAGGAGATCTGGCTGGCTGCTTTCAAGCTGGAATTCGAGAATCATGAACCTGAGAGAGCGAAAATGCTCCTTGCTAAGGCCCGAGAAAGAGGAGGCACTGAAAGAGTTTGGATGAAATCAGCCATTGTAGAGAGAGAGCTCGGTAACACTGCCGAGGAGAGGAAGCTGCTTGATGAAGGTCTGCAACGCTTCCCATCATTCTTCAAGTTGTGGTTGATGCTTGGGCAGCTGGAGGAGCGCCTTGGACACCAGGCGAAGGCAAAGGAAGCATATGATTCTGGTCTTCGGAACTGTCCCCACTGCATTCCTCTCTGGCTTTCACTTTCTAACCTGGAGGAGAAGTTGGTGGGCCTGAGCAAAGCTCGAGCGGTGCTCACCATGGCTAGGAAGAAGAATCCTCAGAACCCTGAACTGTGGCTCGCTGCTGTCAGAGCTGAGTTAAGGCATGGCAATAAGAGGGAGGCAGATATCTTGATGGCAAAGGCACTTCAGGAATGCCCTAACAGTGGTATCTTATGGGCAGCTCAAATTGAGATGGTTCCCCGTCCGCAACGGAAATCCAAGAGTACAGATGCACTTAAGAAATGCGACCAAGATCCCCACGTCATTGGTGCCGTGTCCAAATTGTTTTGGCATGACAGGAAAGTGGACAAGGCAAGAAACTGGCTCAACAGGGCTGTGACACTTGCTCCTGATATTGGGGACTTCTGGGCCTTGTACTACAAATTTGAACTTCAGCATGGAACTGAGGAGAATCAGAAGGATGTGCTAAATCGATGTGTCGCTGCAGAGCCGAAGCATGGTGAGAAATGGCAGGCAATTTCAAAGGCAGTTGAGAATGCTCACCAGCCAACTGAAGCAATTTTGAAGAAAGTTGTGATTGCCCTCGGGAAAGAAGAAACTGCGGCAGAGAACAACAAAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62353.p1 GENE.R_Transcript_62353~~R_Transcript_62353.p1 ORF type:complete len:1027 (+),score=324.97,PRP1_N|PF06424.8|1.8e-55,TPR_14|PF13428.2|11,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|5.2,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|0.23,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|9.4e+03,TPR_14|PF13428.2|5.6e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|0.46,TPR_14|PF13428.2|19,TPR_14|PF13428.2|0.00042,TPR_14|PF13428.2|0.0051,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|0.35,TPR_14|PF13428.2|0.52,TPR_14|PF13428.2|3e+03,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|26,TPR_19|PF14559.2|51,TPR_19|PF14559.2|35,TPR_19|PF14559.2|8e-05,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|0.0071,TPR_19|PF14559.2|40,TPR_16|PF13432.2|19,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|5.8e+03,TPR_16|PF13432.2|93,TPR_16|PF13432.2|25,TPR_16|PF13432.2|8.4,TPR_16|PF13432.2|0.21,TPR_16|PF13432.2|24,TPR_16|PF13432.2|0.19,TPR_16|PF13432.2|19,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|1.6e+03,TPR_17|PF13431.2|0.2,TPR_17|PF13431.2|0.91,TPR_17|PF13431.2|1.1e+03,TPR_17|PF13431.2|3.1e+03,TPR_17|PF13431.2|2e+03,TPR_2|PF07719.13|7.5e+02,TPR_2|PF07719.13|5.2e+02,TPR_2|PF07719.13|6.8e+02,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.093,TPR_2|PF07719.13|6.7e+03,TPR_2|PF07719.13|29,TPR_2|PF07719.13|8.2 R_Transcript_62353:377-3457(+)
MVYITTFDNKTLAFNTNPNSTTLGALNHQIFDRLGVPTDKQFLLLSSSLRRVIGDSNCLIADLGIRSNSTLTLHVPLYGGMQAPVQSKNKLDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSTTTIGGAAGAAAPGGAVGRGRGKEEEEEEEGDEKGYDENQKFDEFEGNDVGLFASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLKRKLQTMSAEEWDSIPEIGDYSLRNKKRRFESFVPVPDTLLEKARQEKEHVMALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVMKLKLDRLSDSVSGQTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKIQVARQLINKGCDECPKNEDVWLEACRLASPDEAKAVLAKGVKAIPNSVKLWLQAAKLEHDDGNKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLQRAVECCPLHIELWLALARLETYDMAKKVLNRARERLPKEPAIWITAAKLEEANSNTAMVEKIIERGIRALQREGVVIDREAWMKEAEAAERAGSVVTCQAIIKHTVGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALSVFLTKKSIWLKAAQLEKSHGTRESLDALLRRAVTYVPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERAKMLLAKARERGGTERVWMKSAIVERELGNTAEERKLLDEGLQRFPSFFKLWLMLGQLEERLGHQAKAKEAYDSGLRNCPHCIPLWLSLSNLEEKLVGLSKARAVLTMARKKNPQNPELWLAAVRAELRHGNKREADILMAKALQECPNSGILWAAQIEMVPRPQRKSKSTDALKKCDQDPHVIGAVSKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEENQKDVLNRCVAAEPKHGEKWQAISKAVENAHQPTEAILKKVVIALGKEETAAENNKN*

Click here to download the sequence:
Link to NCBI Protein BLAST