Transcript Information: R_Transcript_62392.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7619751147843
Replicate 22.2168039655217
Replicate 31.93480739877
Condition 2: 8 Hour
Replicate 12.1789834568438
Replicate 22.5969651610427
Replicate 32.3818855565214
Condition 3: 24 Hour
Replicate 12.2853925747036
Replicate 20.99797551541074
Replicate 31.9807877544704


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62392.p1 GENE.R_Transcript_62392~~R_Transcript_62392.p1 ORF type:complete len:663 (+),score=176.06 R_Transcript_62392:165-1991(+)
ATGAACTCAAATTCTTCCAGTCGTTCATCACCAAGCCGCCCAATCTCCGACATAATATCAGCCCTAAAATCCTCATTTCGTGAAACCGATTTCAGACAAGCCATCAAAGACTTGGAATTCAGAGAGTCGAAATTGATCAAAGACAAGGTCCAGAATTGGCACGAAAAGCACCACATTTTAGAGGGTGATTATCGCCAATTACAGATTAAGGTGGTAGAATTGGAGAATGAACTGCATTGTGTAAGGAGGGAACGTGAAATTAGTGCCAATCTATTGAGCGATTCTACTAGGGATTTGAGTGTGGTGAAGGAGAGAGAGGAGAAGGCTATAAAAAGGTATGACAAGTTGATTATTGATTTTAGGGAAACTGAGAGACACAAGTTGAAATTGAATGGGGAATTGGATGAACTGAGAGAAGATAACAAATACAAGGACGAGAGGATCAAGGAATTGGTGAAGAAATTGGAAGAACAAAGGAGGACTGCAAGGGATGATGATGATGAGAAGAAGTTTGATGAATTGAAGAGGAAAATTAGGGTTTTGGAGATGGAGAATTCGGAGCTTTTAAAGAGTAATGAAGTTTTAGAAAGGGGTAAAGATGAAGCTATTGTGAGGTACAAGGAGATGACGGACAAAATTTGTGTTTTGGAGATGGAGAATTCGGAACTCTTGAAGAGTAATGCGGGTTTAGAAAGGGGTAAATATGAAGCAATTGCGAGGTGTGAGGAGATGATAGAGAAAATTAGAGTTTTGGAGGATCAAGTTGTGGAGCTTGAAAGGGAAAATGAAACTTTGGAAGAAGAGGAAATGAGAATAGTAAGGGAAAAAGGGGAGAAGATTGAGGAACTGATGAAGAAAATTAGGGTTTTGGAGATGGAGAATTCGGAGCTTTTGAAGAGTAATGCAGGTTTCGAAAGGGATAAAAGGGAAGCGAGTGCAAGGTATGAGGAGATGATGAAGAAAGTTAAGGTTTTGGAGGATCAAGTTGAGGAGATTGGAAGGGAAAATGAGAATATTCAGGAACTGACAAAGGAAAATGAGGAGATGGTGGCAAAAATTCGGTGTTTGGAGGCGGAGAAGAGACAACTGTCTGAGAAAAATGAGGAGTTGATCAAATATAAGAATGAAGCAATAGCGAAGAATGAGCAAATGGAGAAGCAGGTTATGAAGCTGGAGGAAGATGTTGTGGGATTGCTGCCCTTGAATGTGGCAAGGGATAGAAATTCTTTAAATACCCATTTAGAAAAAATCTTTGAAGCTATTGGTTCCGGGGAAACGTCTAGTGCACCAATGAACAAAGGAGGTGTTCCTCACATGAATGAATTACATTGCCATCAGAATCGTGACGTGAAACTTGAAGAAACTGTGAAGCGAAAATCTGATTTTGGGAGAGAAGTAAAGAAAGCAACTTATGTTAAGGCTGCATCTAGTAGTCTTATCGTGCTCTCCGACAGTGACAATGATGATTTGGCGGCTACTCCTACCAGTCTAGTACCCAAAAGGAAGCGGTGTGATGATGATTCCAGCAATGATCACCTGAATCCTAAGCATAGGGCCAGGAAACTCTCTGATTTGTCGGATGAGCTGGTCAAGCATACATCATCCATATTTGCTAGCAAAAGTGGCAATCAGTTTGCTACACCTCAGAGACAGACAGCGGCCGCTATTAGAAAATGCAATGAAATGCCTGATGCAAAAGTCAAGGAGTCCCTTAGTCGTAGTTTCTTTGATGATGACAACATTCACAATGATGATACAAGCCTGTTTTGTAGTCCTCAAGCTAGAGAGCTTATAGCTGTTTGCCGAAGAAGCAGGGTCCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62392.p1 GENE.R_Transcript_62392~~R_Transcript_62392.p1 ORF type:complete len:663 (+),score=176.06 R_Transcript_62392:165-1991(+)
MNSNSSSRSSPSRPISDIISALKSSFRETDFRQAIKDLEFRESKLIKDKVQNWHEKHHILEGDYRQLQIKVVELENELHCVRREREISANLLSDSTRDLSVVKEREEKAIKRYDKLIIDFRETERHKLKLNGELDELREDNKYKDERIKELVKKLEEQRRTARDDDDEKKFDELKRKIRVLEMENSELLKSNEVLERGKDEAIVRYKEMTDKICVLEMENSELLKSNAGLERGKYEAIARCEEMIEKIRVLEDQVVELERENETLEEEEMRIVREKGEKIEELMKKIRVLEMENSELLKSNAGFERDKREASARYEEMMKKVKVLEDQVEEIGRENENIQELTKENEEMVAKIRCLEAEKRQLSEKNEELIKYKNEAIAKNEQMEKQVMKLEEDVVGLLPLNVARDRNSLNTHLEKIFEAIGSGETSSAPMNKGGVPHMNELHCHQNRDVKLEETVKRKSDFGREVKKATYVKAASSSLIVLSDSDNDDLAATPTSLVPKRKRCDDDSSNDHLNPKHRARKLSDLSDELVKHTSSIFASKSGNQFATPQRQTAAAIRKCNEMPDAKVKESLSRSFFDDDNIHNDDTSLFCSPQARELIAVCRRSRVQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST