Transcript Information: R_Transcript_62395.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5425920928033
Replicate 23.6418922290713
Replicate 33.247712419364
Condition 2: 8 Hour
Replicate 13.9147838377194
Replicate 23.1703211056884
Replicate 34.2709672047969
Condition 3: 24 Hour
Replicate 14.3630221880705
Replicate 23.6259777059924
Replicate 34.2256805428701


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62395.p1 GENE.R_Transcript_62395~~R_Transcript_62395.p1 ORF type:complete len:663 (+),score=175.48 R_Transcript_62395:165-1991(+)
ATGAACTCAAATTCTTCCAGTCGTTCATCACCAAGCCGCCCAATCTCCGACATAATATCAGCCCTAAAATCCTCATTTCGTGAAACCGATTTCAGACAAGCCATCAAAGACTTGGAATTCAGAGAGTCGAAATTGATCAAAGACAAGGTCCAGAATTGGCACGAAAAGCACCACATTTTAGAGGGTGATTATCGCCAATTACAGATTAAGGTGGTAGAATTGGAGAATGAACTGCATTGTGTAAGGAGGGAACGTGAAATTAGTGCCAATCTATTGAGCGATTCTACTAGGGATTTGAGTGTGGTGAAGGAGAGAGAGGAGAAGGCTATAAAAAGGTATGACAAGTTGATTATTGATTTTAGGGAAACTGAGAGACACAAGTTGAAATTGAATGGGGAATTGGATGAACTGAGAGAAGATAACAAATACAAGGACGAGAGGATCAAGGAATTGGTGAAGAAATTGGAAGAACAAAAAAGGATTGCAAGGGATGATGATGGTGAGAAGAAGGTTGATGAATTGATGAGGAAAATTAGGGTTTTGGAGATGGAGAATTCGGAGCTTTTAAAGAGTAATGAAGTTTTAGAAAGGGGTAAAGATGAAGCTATTGTGAGGTACAAGGAGATGACGGACAAAATTTGTGTTTTGGAGATGGAGAATTCGGAACTTTTGAAGAGTAATGCAGGTTTAGAAAGGGTTAAACATGAAGCAATTGCGAGGTGTGAGGAGATGATAGAGAAAATTAGAGTTTTGGAGGATCAAGTTGTGGAGCTTGAAAGGGAAAATGAAACTTTGGAAGAAGAGGAAATGAGAATAGTAAGGGAAAAAGGGGAGAAGATTGAGGAACTGATGAAGAAAATTAGGGTTTTGGAGATGGAGAATTCGGAGCTTTTGAAGAGTAATGCAGGTTTCGAAAGGGATAAAAGGGAAGCGAGTGCAAGGTATGAGGAGATGATGAAGAAAGTTAGGGTTTTGGAGGATCAGGTTGAGGAGATTGGAAGAGAAGATGAGAAAATTCAGCAAATGACAAAGGAAAATGAGGAGATGGTGGCAAAAATTCGGTGTTTGGAGGCGGAGAAGAGACAACTGTCTGAGAAAAATGAGGAGTTAATCAAATATAAGAACGAAGCAATAGCAAAGAATGAGCAAATGGAGAAGCAAGTTATGAAGCTGGAGGAAGATGTTGTGGGATTGCTGCCCTTGAATGTGGCAAGGGATAGAAATTCTCTAAATACCCATTTAGAAAAGATCTTTGAAGCTATTTGTTCCGGGGAAATGTCTAGTGCACCAATGAACAAAGGAGGTGTTCCTCACATGAATGAATTACATTGCCATCAGAATCGTGACGTGAAACTTGAAGAAACTGTGAAGCGAAAATCTGATTTTGGGAGAGAAGAAAAGAAAGTAACTTGTTTTAATGCTGAATCTAGTAGTCTTATCGTGCTCTCCGACAGTGACAATGATGATGAGCCGGCTACTCTTACCAATGTAGTACCCAAAAGGAAGCGGTTTGATGATGGTTCCAGCGATGATCATCTGAATTCAAATCAGAGGGCCAGGAAACTCTCTGATTTGTCGGATGAGCTGGTCAAGCATACATCATCCATATTTGCTAGCAAAAGTGGCAATCAGTTTGCTACACCTCAGAGACAGACAGCGGCCGCTATTAGAAAATGCAATGAAATGCCTGATGCAAAAGTCAAGGAGTCCCTTAGTCGTAGTTTCTTTGATGATGACAACATTCACAATGATGATACAAGCCTGTTTTGTAGTCCTCAAGCTAGAGAGCTTATAGCTGTTTGCCGAAGAAGCAGGGTCCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62395.p1 GENE.R_Transcript_62395~~R_Transcript_62395.p1 ORF type:complete len:663 (+),score=175.48 R_Transcript_62395:165-1991(+)
MNSNSSSRSSPSRPISDIISALKSSFRETDFRQAIKDLEFRESKLIKDKVQNWHEKHHILEGDYRQLQIKVVELENELHCVRREREISANLLSDSTRDLSVVKEREEKAIKRYDKLIIDFRETERHKLKLNGELDELREDNKYKDERIKELVKKLEEQKRIARDDDGEKKVDELMRKIRVLEMENSELLKSNEVLERGKDEAIVRYKEMTDKICVLEMENSELLKSNAGLERVKHEAIARCEEMIEKIRVLEDQVVELERENETLEEEEMRIVREKGEKIEELMKKIRVLEMENSELLKSNAGFERDKREASARYEEMMKKVRVLEDQVEEIGREDEKIQQMTKENEEMVAKIRCLEAEKRQLSEKNEELIKYKNEAIAKNEQMEKQVMKLEEDVVGLLPLNVARDRNSLNTHLEKIFEAICSGEMSSAPMNKGGVPHMNELHCHQNRDVKLEETVKRKSDFGREEKKVTCFNAESSSLIVLSDSDNDDEPATLTNVVPKRKRFDDGSSDDHLNSNQRARKLSDLSDELVKHTSSIFASKSGNQFATPQRQTAAAIRKCNEMPDAKVKESLSRSFFDDDNIHNDDTSLFCSPQARELIAVCRRSRVQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST