Transcript Information: R_Transcript_62442.p1


Annotated TAIR IDAT2G41710.3
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17400274-17402903 | Reverse length=458
E-Value5.9E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2200759440015
Replicate 23.5348741065978
Replicate 34.7393250198936
Condition 2: 8 Hour
Replicate 15.165375161285
Replicate 24.8985298962435
Replicate 35.9646266135957
Condition 3: 24 Hour
Replicate 18.7547013363253
Replicate 24.7868411790908
Replicate 36.4819571689392


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62442.p1 GENE.R_Transcript_62442~~R_Transcript_62442.p1 ORF type:5prime_partial len:493 (+),score=92.59,AP2|PF00847.16|5.6e-13 R_Transcript_62442:2-1480(+)
TCCAACAAGTTTATTTTCAAAAACAGTCAAATGACCAGATTACCCCTCACTTTCTTCATCCTAGCCGTTGAGCTCCCCCCAACCCCTTTACTTTTCTTCTTCCTATCTCCTCCTCTGTCACTCACTATTATTAGTAGGGGAGTGGTAGTTCTTCTCTCTCTCTTGAATTCTTCTTCTTTGTGGGTTTCTACCGTTGGGATGGCGTCGACGTCGAGTGGCGGCGGCGGAGGAGGAGGAGGGGAGGTTGTGGCGATGGCGGCGGAGACGGTGAAGATGGGGACGGAGCAGAGGAGTCAAGAGAGTGGTGGGGTGGTGGTGAAGAAGGTGAAGAGAGAAAGAGGGTCGACGGCGAAAGAGAGGATCAGTAAAATGCCGCCTTGTACTGCTGGCAAGCGCAGCTCCATCTATCGCGGAGTTACCAGGCATAGATGGACTGGCCGTTATGAAGCTCATCTTTGGGACAAAAGCACTTGGAACCAGAATCAGAATAAGAAGGGCAAACAAGTTTATTTGGGTGCTTATGATGATGAGGAAGCTGCGGCTAGAGCATATGATCTCGCTGCCTTGAAGTATTGGGGTCCAGGGACTCTTATCAACTTTCCAGTCACGGATTATAGTAGAGATCTAGAAGAAATGAAGAATTTTTCTAGAGAGGAATATCTTGCATCACTTAGGAGAAAGAGTAGCGGCTTCTCGAGAGGGATTGCTAAATATCGTGCACTTTCCAGTGGCCGATGGGAACCATCACTTGGTCGTACAACCGGAACTGAATACCTCCACGGTATTCACTATGGTAAAGGAGAAGATCCAGCAACGGAGGGTGAATATCCCAGTGGTTTATGCATGGAAAGAAAAATCGATTTAACAGGTTACATCAAGTGGTGGGGGCCAAACAAAATTCGACCATCAGATGCTCATACAAGATCATCAGAGGTACTAAGACATAGCAGCTCTGAAGATGCTGGGACTGAGCTCAAGTCATTGGAACGGGTAATCAAGTCTACGGAGCCTTACCAGATGCCTCAGTTGGGCACATCCTATGAAGTGAAGAAGAGTAAAGACTCCGCTACCTCTGCCTTGAGCATATTATCTAGGTCTGCTGCCTACAAGAACATGCTAGACAAAGCCTCTAAATCTAAGGAAACTGTTATCGACAGCGATGAAAAGGAAAACAAAAGTAACATTAGCAAGATTGACCATGGAAAGGCTGTTGAGAAAGCGAGTGATGACACTGGAATGGAGAGACTGGGACCTGCCCTGGGAGTAGGTGGGATGCCTCTTCATAAGAGCGCATTTCCTTTGTCTCCCTTACTGACTGCACCACTTCTGACGAACTACAACACTATTGATCCTTTAGCAGACCCTGTTCTTTGGACATCTTTGATGCCTGTTTTGCCTACTGCTCCTCCTCGAACCGCTGAGGTTACCAAAACCGAAACCAGCTCAACGTATAGCTTCTTTAGGCAGGAAGAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62442.p1 GENE.R_Transcript_62442~~R_Transcript_62442.p1 ORF type:5prime_partial len:493 (+),score=92.59,AP2|PF00847.16|5.6e-13 R_Transcript_62442:2-1480(+)
SNKFIFKNSQMTRLPLTFFILAVELPPTPLLFFFLSPPLSLTIISRGVVVLLSLLNSSSLWVSTVGMASTSSGGGGGGGGEVVAMAAETVKMGTEQRSQESGGVVVKKVKRERGSTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYSRDLEEMKNFSREEYLASLRRKSSGFSRGIAKYRALSSGRWEPSLGRTTGTEYLHGIHYGKGEDPATEGEYPSGLCMERKIDLTGYIKWWGPNKIRPSDAHTRSSEVLRHSSSEDAGTELKSLERVIKSTEPYQMPQLGTSYEVKKSKDSATSALSILSRSAAYKNMLDKASKSKETVIDSDEKENKSNISKIDHGKAVEKASDDTGMERLGPALGVGGMPLHKSAFPLSPLLTAPLLTNYNTIDPLADPVLWTSLMPVLPTAPPRTAEVTKTETSSTYSFFRQEEG*

Click here to download the sequence:
Link to NCBI Protein BLAST