Transcript Information: R_Transcript_62494.p1


Annotated TAIR IDAT3G44820.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16361864-16364411 | Reverse length=651
E-Value6.5E-288
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9121225733838
Replicate 22.6410440775218
Replicate 33.8177895993587
Condition 2: 8 Hour
Replicate 12.5024861974386
Replicate 23.340068828479
Replicate 34.3381207771994
Condition 3: 24 Hour
Replicate 14.259467378725
Replicate 22.8436025613637
Replicate 35.3342676516809


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62494.p1 GENE.R_Transcript_62494~~R_Transcript_62494.p1 ORF type:complete len:636 (+),score=109.22,NPH3|PF03000.10|5.7e-84 R_Transcript_62494:346-2253(+)
ATGTCTCAAATGGGTAAAGTTGCTGAATTTCGTCGTGAAGGCATTGATTGGTTCTGCAATGCAGGTTTGCCAAGCGACGTAACCGTTACTGTAGATGGAGTGAACTTTCATCTTCACAAGTTTCCTCTTGTATCAAGATGTGGGAAAATGGATAAAGAATTTGAAGCATCTCAAGAAAAACAGGAGAAATCTTCCACCATATTGTTGGAGGGATTCCCAGGGGGTCCTGACACTTTTCTTATCACTGCCAAGTTCTGCTATGGGCTTCGGATTGATTTGACTCCCAGGAATATAGTGATGGTTTATTGTGCTGCAGGCTATCTCGAGATGACAGATCAATATGGAGAGGATAACTTGCTGTCCAGATGTGACAGTTATTTCCACAAAAACATAATTCGTAACTGGAAAGATTGTATTGTTTCACTTCAAAGTGCTGAGCCTGTCATACCATGGGCAGAAAAACTTCAGATTATTAGTAAATGCCTAAACGCCATGTCAACAATGGTATGTACGGATCCAAGTTTGTTTGGATGGCCCATGATGATGTATGGTAGTTTACAGAGTCCTGGCGGAAGCATACTATGGAATGGAATAAACACTGGTGCAAGAATTAGAAGTGTGGAGTCCGATTGGTGGTATGAAGATATCTCATATCTCTGCATTGATTTGTTTGAAAAACTCATTAAGACAATGCAAGCAAGAGGCATACGGCCCGAAAATATAGCTGGAGCAATAATGTATTACACGAGAAAACACCTCCCAGGCCTTGGAAGATGGCAGGGTGGACGTGGAGGTACAACCAGAACTGTTGCGAGTCTTAGCTTGACACCCGCAACTGTAGATCAAAAGGCCCTACTGGAAACCATTGCAATGATATTACCTGAAAAGAAGGGAAAATCTTATTGTCGTTTCTTATTAGGGCTCCTCCGAACAGCATTGATTTTGGGTGTTAGTGAAGAATGCAAGGACTCTTTGGAAAGAAGAATAGGAATGCAACTCGAATTGGCTAGCCTCGATGGGCTTCTGATACCTACTTACTCTGACTCCGACACCTTGTATGACACAGATTGTGTTCAGAGGATTATCCAGCATTTTTTGTCATCAGAGGCACGGATCCCATCATTTTCTCCATGTTCACCTGATATAGAAGCATCACCATCATCTGAACCACTGAGGCAAGTGGCAAAGTTGGTGGATAGCTATGTTGCAGAAGTTGCTTCTGATGTGAACTTGAAACCAGACAAGATACATGCTCTTGCAGAGGTACTTCCTGAAGATTCAAGATCCTTCCATGATGGCCTATATAGAGCTCTTGATATATATTTCAAGGCTCATCCCTGGCTTTCAGACACGGAGAAGGAACAACTTTGCAACATTATTGATTACCAGAAGCTCTCGATAGATGCATGTGCTCATGCATCCCAAAATGAAAGACTGCCCCTCAGAGTTGTTCTTCAGGTCCTGTTTTTCGAACAATTACATTTGAGAGCTGCCATTGCTGGTTGTCTCCATGTTATGGGCAATGAAAATGCAATAGGTAATGCTAATACCGCACGAAGTGAGATGGCGGGCCAGATTATACAGAGAGATGGATGGGTGTCAGTTGTGCGTGAGAACCATGGTCTGAAAGGAGACATGGATAGGATGAGATCTAGAGTGCAGGAGTTGGAAGAAGAATTTGGTAAAATGAAGCAGGACATGAGAAAAGTGAGTAAATCATATAGTTCACTTAGTTCTCCCCGCTTGGTTGCTTGGAAACTTGGGTGCAAGTTGCGTCCTCGATCCTCAGATCTTCGAAAAGAGGCAATCGACATTGGTGAACCTACTCCTAGGGCTTCAGTTGAGCAAGTTAAATCTTCCCGACTTTTGAGGCATCGCAAAAGTTTCTCCTGCTCAAACGGAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62494.p1 GENE.R_Transcript_62494~~R_Transcript_62494.p1 ORF type:complete len:636 (+),score=109.22,NPH3|PF03000.10|5.7e-84 R_Transcript_62494:346-2253(+)
MSQMGKVAEFRREGIDWFCNAGLPSDVTVTVDGVNFHLHKFPLVSRCGKMDKEFEASQEKQEKSSTILLEGFPGGPDTFLITAKFCYGLRIDLTPRNIVMVYCAAGYLEMTDQYGEDNLLSRCDSYFHKNIIRNWKDCIVSLQSAEPVIPWAEKLQIISKCLNAMSTMVCTDPSLFGWPMMMYGSLQSPGGSILWNGINTGARIRSVESDWWYEDISYLCIDLFEKLIKTMQARGIRPENIAGAIMYYTRKHLPGLGRWQGGRGGTTRTVASLSLTPATVDQKALLETIAMILPEKKGKSYCRFLLGLLRTALILGVSEECKDSLERRIGMQLELASLDGLLIPTYSDSDTLYDTDCVQRIIQHFLSSEARIPSFSPCSPDIEASPSSEPLRQVAKLVDSYVAEVASDVNLKPDKIHALAEVLPEDSRSFHDGLYRALDIYFKAHPWLSDTEKEQLCNIIDYQKLSIDACAHASQNERLPLRVVLQVLFFEQLHLRAAIAGCLHVMGNENAIGNANTARSEMAGQIIQRDGWVSVVRENHGLKGDMDRMRSRVQELEEEFGKMKQDMRKVSKSYSSLSSPRLVAWKLGCKLRPRSSDLRKEAIDIGEPTPRASVEQVKSSRLLRHRKSFSCSNGS*

Click here to download the sequence:
Link to NCBI Protein BLAST