Transcript Information: R_Transcript_62560.p1


Annotated TAIR IDAT5G13090.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4153758-4154567 | Reverse length=269
E-Value5.8E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.187800561369
Replicate 224.963028182244
Replicate 323.205196717926
Condition 2: 8 Hour
Replicate 117.865907974537
Replicate 221.778187851839
Replicate 316.673466433059
Condition 3: 24 Hour
Replicate 121.536965738042
Replicate 216.882690030247
Replicate 318.251636481582


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62560.p1 GENE.R_Transcript_62560~~R_Transcript_62560.p1 ORF type:complete len:307 (+),score=71.16 R_Transcript_62560:112-921(+)
ATGAAGCTCAACAAAGGTAAAAACAAAGGCAAGGTCCACCCTTCCCCTTCTTCATCTTCTTCTTCACCTTCTTCGTTTTCTCTCTCCTCAAGCTCAAACTCGACAGACCCAATATCAGCTTTGAACATTCTCTTACCAGCAGCTATACTGACCCTCATCTCAGCTCTCTCTCTCCCTGACCGTGAAGTTTTTGCTTACATGATTTCTCGCTCTCTCAAATCCCCACCTTCCTTTATTGCTCCTCCCATCACCACCAAAAGAAAATCCAAGAATTCTTCTTCTTCTTCTTCTTCATCATCTTGTTGTTTATCCTCTTCAGGTCAACACCGGACCCAAAAGTGGCCAGCCTTTGACTGCGACTGTTTCGACTGTTACACAGCCTACTGGGTTCGCTGGGACTCTTCTCCTCACCGTGAGCTCATCCACCAAGCGATTGAAGCCTTCGAAGAACACTTGGCCTCTTCTGAGCTACTTCTTCCCAAGAAGAAAGAAAGAAGTCGCTCTAGGAAAGATAAAGACCCCAAAAGCCGCCTAATCACTGAAGAGCAAAAAGTTATCATTGAAGAAAAGGAAGAAAAGTCGCCAGTTAATGGGGAGTCTTTGCCTGAGGAAGTCGCCACCGCCGTAAGCGATGTTAAGGAGGTTGACGAAAGTGGGGGCCAAGAGGAGGTAGGGGAAGAAGAAGAGGAGGAGCAACAGCAGAAGCAGCAGGTGCAGCAACAACACAAGGGGTTGGCGAGGAAGGTTTTGCCGGACGTGATTGGGTTGTTCAATTCTCGTTTATGGAATCTTTGGGGTCCGAATGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62560.p1 GENE.R_Transcript_62560~~R_Transcript_62560.p1 ORF type:complete len:307 (+),score=71.16 R_Transcript_62560:112-921(+)
MKLNKGKNKGKVHPSPSSSSSSPSSFSLSSSSNSTDPISALNILLPAAILTLISALSLPDREVFAYMISRSLKSPPSFIAPPITTKRKSKNSSSSSSSSSCCLSSSGQHRTQKWPAFDCDCFDCYTAYWVRWDSSPHRELIHQAIEAFEEHLASSELLLPKKKERSRSRKDKDPKSRLITEEQKVIIEEKEEKSPVNGESLPEEVATAVSDVKEVDESGGQEEVGEEEEEEQQQKQQVQQQHKGLARKVLPDVIGLFNSRLWNLWGPNV*

Click here to download the sequence:
Link to NCBI Protein BLAST