Transcript Information: R_Transcript_62683.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value2E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.663649687844
Replicate 211.026834031581
Replicate 313.321064429417
Condition 2: 8 Hour
Replicate 113.035640331627
Replicate 214.183341119889
Replicate 315.975158507631
Condition 3: 24 Hour
Replicate 119.57194357182
Replicate 217.533137463373
Replicate 317.268716647456


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62683.p1 GENE.R_Transcript_62683~~R_Transcript_62683.p1 ORF type:complete len:834 (+),score=137.79,SEO_N|PF14576.2|2.7e-93,SEO_C|PF14577.2|3.2e-81 R_Transcript_62683:186-2687(+)
ATGACAACCAACCCAACTCCAATGGCCCCCAAACTAACTGCTCCACTACCACCTCTACAGCAGCCACTGAGAGCCTCTGAACGAGCTGTTCCGTACTATCCTTCTGACGACACCAGGCCACCAATGTCGAGGGGCACTGAACAAGGAGGTTCCCTCTTTCCACCCGAGGATCCCAGGAATCAACTGTCGAGGGGGGGCACTGCACGAGGCTCCTACTATAATCCAACTGAGGATGCCAGGCAACAACAGTTGTCGAGGGGCACTGAGCAAGGCTCCTTGTTTCCGTCCGAGGAAGCAAGGCAACAACTAATGCCTAGGCCCATTGAACGAGGCCCCTTATTTTCATCTCTCGATGGCAGGCCGCCTATGGCAAGAGGCCCCATTGATCAACGGAGCATTTTCCTGACGTCTGATGATCATGCCCTTACCAAACAGATTTTGAAGCTCCATAGCCCTGAGCCTCGGAGTATTAACATCAAGCCTCTTTTCTATCTCGTTGAGGACATTATATACCGTGCTACTCAAACTGTTGACGGGCAACCAATGGGTATATCACAGAGGGAGTCTCTGGAAGGAAGACTTACCCTTAATGGTCTTGAAGAAGTTCCTGATTCAGCACTTATCATTGAACGGATTTCCTGTGAGATGACAAGCAAGCTGTTAAGTGGGACTGATGCACACCACACAACTCTCTCAGTGCTACGAATGTTGCCTGGCTTCACATGGGAAGTCAAGGTAGTCATGACATTGGCGGCATTCTCTTTAACTTATGGAGACTTCTGGCTACTTGTTCAAATTTACTCCACAAACCCTCTCGCAAAATCCATGGCGCTTATAAAGCGCTTGCCTGTGGTTTTGGAGCATTCAGGAGCATATAAGGCTCAGTTTGATGCGATCAATAATCTTATCAAGGCCATGCTTGAAACAGCCAGGTGCATTGTCGAGTTTGGAGACTTACCTGCAACTTACATCACAGATGAGGATCCTGAAGTTAAGGCTGCTCTTGGTCATTTTCCGATTGCTGTCTATTGGGTCATCAGAAGTGCCGTTGCTGCTGCTGCGCAGATTACAACCTTATCTAGCACAGGATTTGAATATGTGCGAGCAACTTCAGAAGCATGGGAGCTTTCCAACTGGGCTCACAAGCTGAAAACCATCAGTGAACATCTCAGAAACACACTAAACAACATGTATAGGCTCATAGCTGAGAAGAGAGAAATTGATAGTTATAACTTGATTAGAAAAATTATCTACCACACAATGCATATTGACAACATGAAGGTGCTCAAGATTCTCATCAGCGCCAGTGAGACAGAACCTGCACTCTTTGATGGTCCGTCCAAGAGAAGGGTCCATCTTGATACAGTAAGGAGGAAAAATGTGTTACTACTCATATCAGGTCTGGATATCTCTCATGAAGAGCTTTTCATCCTTGAGCAAAGCTACACAGAGTCAAAGATGCATGCATTTGAGATCATCTGGATCCCAGTCGTGGACCGTTCAGAGCCGTGGACTGATGCCATGAAAGCTCAGTTCCTGAACGTGCAGGCCTCAATGCCCTGGCACTCGGTACATGACCCTTTGATAATTGAAAATTCAGTGATCAGATTCTTCAGGGAGGATTGGCACTACAAGGGCAAGCCTATCCTTGTGGTGCTAGACCCTCAGGGGAAAGTTGTGAGCCCAAATGCAATTCACATGATGTGGATTTGGCAAAGCAATGCTTTCCCCTTCACAAGCATCAGGGAGGAGTTGCTTTGGGAGCAGGAGAACTGGCGGCTGGAGCTCCTTCTAGATGATATTGATCCTACTGTTTCTGATTGGATTCGACAAGGCAAGTACATATTCATTTATGGAGGAGACGACATGGAGTGGATTCGGAAGTTCACAACTGAGGCACGTGAAGTGGCACGTGAACTCCAACTCCCGCTAGAGATGATCTATGTAGGGAAGAGCCACCACAAAGAGGCGGTGCGCAAGCTGAGTGCAGCAATAGCACATGAGGAGCTGAGCCATTGCTGGCAAGAACCAGCACAAGTTTGGTACTTCTGGACTAGAATAGAAAGCATGATCCACTCCAAAATCCAACTGGGAAAATTCAAGGACCATGGTGACATCATCCTACAAGAGGTCCAAAGGCTCCACAGCTATGACAAGGCCCATGGTGGGTGGGCCGTGCTAGCTAGGGGTTCCGAAATTGTGGTCCATGGGCTTGGTAGGATCGCCTTGACGGCCCTCAAAGAATTCGATAGGCCTCGTGCATTGAAGGATGGATTTGGTACAGTCTATAGAGAGTTCTATATAAAGACTTACATGAGAGAACATCCCTGTCACCGGATTGAGTTCCCGTCTACTTCTAAGTTGCCACCAAGTATGCTTTGCCCTGATTGTCGCCGCGAAATGCAGAAGTACAGCTCTTTCATCTGCTGTCATGAGAATGAAATGTTCCCTGCTGATGTCACATCCGCTCTTGCTCCTTCCCCTGCCCCATATGAGTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62683.p1 GENE.R_Transcript_62683~~R_Transcript_62683.p1 ORF type:complete len:834 (+),score=137.79,SEO_N|PF14576.2|2.7e-93,SEO_C|PF14577.2|3.2e-81 R_Transcript_62683:186-2687(+)
MTTNPTPMAPKLTAPLPPLQQPLRASERAVPYYPSDDTRPPMSRGTEQGGSLFPPEDPRNQLSRGGTARGSYYNPTEDARQQQLSRGTEQGSLFPSEEARQQLMPRPIERGPLFSSLDGRPPMARGPIDQRSIFLTSDDHALTKQILKLHSPEPRSINIKPLFYLVEDIIYRATQTVDGQPMGISQRESLEGRLTLNGLEEVPDSALIIERISCEMTSKLLSGTDAHHTTLSVLRMLPGFTWEVKVVMTLAAFSLTYGDFWLLVQIYSTNPLAKSMALIKRLPVVLEHSGAYKAQFDAINNLIKAMLETARCIVEFGDLPATYITDEDPEVKAALGHFPIAVYWVIRSAVAAAAQITTLSSTGFEYVRATSEAWELSNWAHKLKTISEHLRNTLNNMYRLIAEKREIDSYNLIRKIIYHTMHIDNMKVLKILISASETEPALFDGPSKRRVHLDTVRRKNVLLLISGLDISHEELFILEQSYTESKMHAFEIIWIPVVDRSEPWTDAMKAQFLNVQASMPWHSVHDPLIIENSVIRFFREDWHYKGKPILVVLDPQGKVVSPNAIHMMWIWQSNAFPFTSIREELLWEQENWRLELLLDDIDPTVSDWIRQGKYIFIYGGDDMEWIRKFTTEAREVARELQLPLEMIYVGKSHHKEAVRKLSAAIAHEELSHCWQEPAQVWYFWTRIESMIHSKIQLGKFKDHGDIILQEVQRLHSYDKAHGGWAVLARGSEIVVHGLGRIALTALKEFDRPRALKDGFGTVYREFYIKTYMREHPCHRIEFPSTSKLPPSMLCPDCRREMQKYSSFICCHENEMFPADVTSALAPSPAPYES*

Click here to download the sequence:
Link to NCBI Protein BLAST