Transcript Information: R_Transcript_62684.p2


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value3E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.361079526481
Replicate 20.73121444235864
Replicate 32.0513496354763
Condition 2: 8 Hour
Replicate 10.85274156532695
Replicate 21.2237298520052
Replicate 32.1673564919865
Condition 3: 24 Hour
Replicate 11.3706153568779
Replicate 21.7556424987524
Replicate 32.2867751165415


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62684.p2 GENE.R_Transcript_62684~~R_Transcript_62684.p2 ORF type:3prime_partial len:201 (+),score=24.99,SEO_N|PF14576.2|7.1e-09 R_Transcript_62684:1475-2074(+)
ATGAAAATAGTTTCTAGGACAGTTAGCATGGCAGAACAATCTTGTATTTCGTATGTTCTGTGTTGCAGATATGTGCGAGCAACTTCAGAAGCATGGGAGCTTTCCAACTGGGCTCACAAGCTGAAAACCATCAGTGAACATCTCAGAAACACACTAAACAACATGTACAGGCTCATAGCTGAGAAGAAAGAAACTGATAATTATAACTTGATTAGAAAAATTATCTACCACACAATGCATATTGACAACATGAAGGTGCTCAAGATTCTCATCAGCGCCAGTGAGACAGAACCTGCACTCTTTGATGGTCCGTCCAAGAGAAGGGTCCATCTTGATACAGTAAGGAGGAAAAATGTGTTACTACTCATATCAGGTCTGGATATCTCTCATGAAGAGCTTTTCATCCTTGAGCAAAGCTACACAGAGTCAAAGATGCATGCATTTGAGATCATCTGGATCCCAGTCGTGGACCGTTCAGAGCCGTGGACTGATGCCATGAAAGCTCAGTTCCTGAACGTGCAGGCCTCAATGCCCTGGCACTCGGTACATGACCCTTTGATAATTGAAAATTCAGTGATCAGATTCTTCAGGGAGGATTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62684.p2 GENE.R_Transcript_62684~~R_Transcript_62684.p2 ORF type:3prime_partial len:201 (+),score=24.99,SEO_N|PF14576.2|7.1e-09 R_Transcript_62684:1475-2074(+)
MKIVSRTVSMAEQSCISYVLCCRYVRATSEAWELSNWAHKLKTISEHLRNTLNNMYRLIAEKKETDNYNLIRKIIYHTMHIDNMKVLKILISASETEPALFDGPSKRRVHLDTVRRKNVLLLISGLDISHEELFILEQSYTESKMHAFEIIWIPVVDRSEPWTDAMKAQFLNVQASMPWHSVHDPLIIENSVIRFFREDW

Click here to download the sequence:
Link to NCBI Protein BLAST