Transcript Information: R_Transcript_62759.p1


Annotated TAIR IDAT1G04790.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1345469-1348143 | Forward length=634
E-Value1.8E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2085873259008
Replicate 25.4602447921695
Replicate 35.8254203369526
Condition 2: 8 Hour
Replicate 16.8602638860816
Replicate 27.5178826879848
Replicate 310.405880226343
Condition 3: 24 Hour
Replicate 18.0814120269935
Replicate 27.2566871924457
Replicate 39.5601468747368


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62759.p1 GENE.R_Transcript_62759~~R_Transcript_62759.p1 ORF type:complete len:696 (+),score=150.93,zf-RING_2|PF13639.2|5e+03,zf-RING_2|PF13639.2|9.7e+03,zf-RING_2|PF13639.2|3.2e-12,zf-RING_11|PF17123.1|6.2e+03,zf-RING_11|PF17123.1|3.2e+03,zf-RING_11|PF17123.1|5.8e+03,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|7.2e-09,zf-RING_11|PF17123.1|3.6e+03,zf-C3HC4|PF00097.21|1e-07,zf-C3HC4_2|PF13923.2|1.4e-07,zf-rbx1|PF12678.3|3e-06 R_Transcript_62759:190-2277(+)
ATGGATGAAGAACGTAATTCTGCCACTTACCCACCTCCACAATTCGTTACAGGGGCTGATGCTGAAATGGGTTTAGCTGATGTTGACTATGATCAAATTGTGGTTGTTCCTGAAACTCCTGATAGGATGCCTAAACAGCAGAGGAATTTTAGGCATTCTGGGTTAGTAGGTAAAGGTATTTTGGATAGAAGGGGTAGGTTTTCTGGTGATAGTGCCCGGCACTTGGGGTTGCACTCTAATCATCGGAGCAGTTTTAGGGACGTTGGTCAAAGTGAGGGTACTGGCAGTTCTTCCATTCCTTCGTCTATAACAGCTGCAGGAACGAATTCTGAGCGCATAGGCAGATTTCATTCGAACAGTCACCATTTGGATGGTGATAAAGTTTCGCATCCTAGATCATCAGGAATGTCTCATAACCACAATAGAAGACATATGACTGTTTTGGATGAACCCCGCGAACCAAAGTCTCCATGTAAAATTGTGGGAAAGGATTCGGGGTCTCAGAAAATGAGTAATGGGTATTTGGTTGTTAAGGATGGTGTCTCTTTACGTACTGCTGGAGATTCGTCTATGTCTCCACGGTATGACAGTAAGGGAAAGAGGAAGATTGGTAATGATAAACCTGTTTGTGATGCTCATCATATGAAAGGCCACATTTGCCTTGATGCTTCAAATTATAATGCTGAAAAAAGTCTCCCCATTCCTTCTCAGCCTGAGGGATTACCCAGAGCGACTTTTCGGAAGAGGTTGGTACGGAATGGGTGTATTTCTCCTCATAATATAGCAAAGGCAAAACAAATAGCAGAGAGTTCTGTTAATAGTTCTGTGGATGCTGATACCGTTGCAGTATCTGGTGGCTCTAATCGTGTGATTGATGTTGACAAAGTCCCTGCTAATGGAAATGCTGCAACTCGAGCCAAAGGAAAAGGAGTGGTAGTTCATCCTTGTTCTCCAAAGGGCCACGGGGATAGGAGGGGTGATGCTCGATGCTTAACTGATAAATGGCATAAGGAAGAATCGCAAGAGCCTGACATCATCATTAGCCAAGAGAACATTGACAACTCGAAGAAGACTCATTTGGGCAAATGCCTGTCTTCATTCGGTTCAAATGCTTCAGAGCCAGTGCTTGTGCTGAATGAGGATCAGTTTTGCACGCCAAGCACATCTAGCAGCAAAAGATGGAAGAGGCATGATGCTGCTTCAGAAAAGAGTTCAGAGGTGATATGTTTGAGTTCGGGTGGTGAGTCATCAGCTGCTCAGTTGGAAGTGAACCGCGGTCGTCTTTGTCAGGGGGCCTTGGGTTCTTCGATAGCTATTCCTGAGTTGTCTTCTGAAGTGAGAGAGAGTGAATCTCCTACTGAAGCCAGGGAAATACAAGTTCAAGTAGATGAGATGCTGGCTCATGAGTTGCAGGAACAACTATATAATGAGATGCCAGAAGCTGCAACTGATGAGGGAGGTTCAATAACCTGGGTACACCAGCAGGTAGACAACATGCAGCAGGCTTCTTCAAGAAGAATCCATCCTGTAAATACTACTAGACGGTTACCTGCACCAGCTACACGGAGACAGCCTCACTCCCAGTCTTTACGCAATCGTTTGTTTCGTCGAGGAGCTCATGCACGGGGTTCTACATCAAATGTAGCAAGGTTAAGGAGTCGCATCAGTCGTCATCCTTCCTTGCTGCCATCTGGAGGGAGGAATATGTTATTCCCTTCAGATATGGACTTAGACATGAGAATGGACTTATTGGAGGCACTAGAGGCTGTGGTCAATGAAGATATTAGAATGGTTAATCAGCTGCTTGATTCTGACCGGGAATTCAATGAGAATGACTATGAGATGTTGTTAGCCCTTGATGAGAACAATCATGAACATCTTGGTGCATCAGTTGCTCAGATAGACAACCTCATAGAATCTACTGTAACTACCGAGAGCACTGAAGTCTGTTCCATTTGTCTGGAAGCCCCAGCCATTGGGGACACCATACGTCATCTCCCTTGTGCTCACAGATTTCACAAAGATTGTATTGATCCATGGCTCAGAAGAAAAAGATCTTGCCCCATCTGCAAGTCAGACGTCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62759.p1 GENE.R_Transcript_62759~~R_Transcript_62759.p1 ORF type:complete len:696 (+),score=150.93,zf-RING_2|PF13639.2|5e+03,zf-RING_2|PF13639.2|9.7e+03,zf-RING_2|PF13639.2|3.2e-12,zf-RING_11|PF17123.1|6.2e+03,zf-RING_11|PF17123.1|3.2e+03,zf-RING_11|PF17123.1|5.8e+03,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|7.2e-09,zf-RING_11|PF17123.1|3.6e+03,zf-C3HC4|PF00097.21|1e-07,zf-C3HC4_2|PF13923.2|1.4e-07,zf-rbx1|PF12678.3|3e-06 R_Transcript_62759:190-2277(+)
MDEERNSATYPPPQFVTGADAEMGLADVDYDQIVVVPETPDRMPKQQRNFRHSGLVGKGILDRRGRFSGDSARHLGLHSNHRSSFRDVGQSEGTGSSSIPSSITAAGTNSERIGRFHSNSHHLDGDKVSHPRSSGMSHNHNRRHMTVLDEPREPKSPCKIVGKDSGSQKMSNGYLVVKDGVSLRTAGDSSMSPRYDSKGKRKIGNDKPVCDAHHMKGHICLDASNYNAEKSLPIPSQPEGLPRATFRKRLVRNGCISPHNIAKAKQIAESSVNSSVDADTVAVSGGSNRVIDVDKVPANGNAATRAKGKGVVVHPCSPKGHGDRRGDARCLTDKWHKEESQEPDIIISQENIDNSKKTHLGKCLSSFGSNASEPVLVLNEDQFCTPSTSSSKRWKRHDAASEKSSEVICLSSGGESSAAQLEVNRGRLCQGALGSSIAIPELSSEVRESESPTEAREIQVQVDEMLAHELQEQLYNEMPEAATDEGGSITWVHQQVDNMQQASSRRIHPVNTTRRLPAPATRRQPHSQSLRNRLFRRGAHARGSTSNVARLRSRISRHPSLLPSGGRNMLFPSDMDLDMRMDLLEALEAVVNEDIRMVNQLLDSDREFNENDYEMLLALDENNHEHLGASVAQIDNLIESTVTTESTEVCSICLEAPAIGDTIRHLPCAHRFHKDCIDPWLRRKRSCPICKSDVR*

Click here to download the sequence:
Link to NCBI Protein BLAST