Transcript Information: R_Transcript_62773.p1


Annotated TAIR IDAT1G20780.1
Annotated Gene Namesenescence-associated E3 ubiquitin ligase 1
Annotated Gene Symbol(s)PUB44, ATPUB44, SAUL1
Annotation TypeOrtholog
Chromosome Positionchr1:7217812-7220609 | Forward length=801
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.252456909384
Replicate 28.383043778006
Replicate 310.721703960853
Condition 2: 8 Hour
Replicate 19.385245532605
Replicate 211.537555741152
Replicate 314.628325020852
Condition 3: 24 Hour
Replicate 111.196866670023
Replicate 28.6161822201518
Replicate 310.110291108444


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62773.p1 GENE.R_Transcript_62773~~R_Transcript_62773.p1 ORF type:complete len:814 (+),score=161.67,U-box|PF04564.11|9.1e-15,HEAT_2|PF13646.2|0.047,HEAT_2|PF13646.2|28,HEAT_2|PF13646.2|35,HEAT_2|PF13646.2|2.6,HEAT_2|PF13646.2|1.2e+02,HEAT_2|PF13646.2|1.8e-06,Arm|PF00514.19|36,Arm|PF00514.19|6.3e+03,Arm|PF00514.19|4.9e+02,Arm|PF00514.19|4.2e+02,Arm|PF00514.19|8.7,Arm|PF00514.19|1.9e+03,Arm|PF00514.19|2.4e+02,Arm|PF00514.19|0.12,Arm|PF00514.19|0.0013,Arm|PF00514.19|9.9e+03,HEAT|PF02985.18|0.61,HEAT|PF02985.18|3.5e+03,HEAT|PF02985.18|3.1e+02,HEAT|PF02985.18|2e+02,HEAT|PF02985.18|9.9e+03,HEAT|PF02985.18|1.4e+03,HEAT|PF02985.18|1,HEAT|PF02985.18|1.1e+04,zf-Nse|PF11789.4|1.9e-05 R_Transcript_62773:778-3219(+)
ATGGCTGGGAGTTCGGGGGGCACTTCAGAACATGATAGTCAGTCAGATGAGAGCTACCAGTATGAGAGATTTCATATAGAACCCATCTTTAGCCCATTTGTTTGCCCTTTAACAAAACAGGTCATGCGTGATCCTGTTACCATAGAAAATGGGAACACATTTGAGCGAGAAGCAATAGAGAATTGGTTCAAGGAATGTGAGGACAGTGGAAGGAAGCCCACATGTCCAGTAACTTCACAAGTATTGCACAGCACAGATTTGAACCCTAGTATAGCTCTAAGGAATACTATCGAAGAATGGACTGCCAGGAACGAAGCTGCAAAACTTGATATGGCACGTAGAACTTTGTCTTCCGGTACTTCAGAAAGGGATATTCTTCAGGCCTTGAAATATGTGGAATACCTCTCAAAAGGAAGTAGATCAAATAAGCATGCTGTTCATAATGCAGAGATCGTACATCTGATTGTAGACATGCTTAGGAATAGCAGCAGAAAAGTTCGATCTAAAGCACTGGAAACCCTTCGAATCATAGCAGAGCAGGACTCAGATATGAAGGAAGTAATGGGTGAAGGGGGCACTGTGCGTACTATAGTCAAATTTTTATCTCCTGAGCAATCTACAGAGAGGGAAGAAGCTATCTCGTTGCTCTATGAGCTTTCTAAATCTTCAAATCTTTGTGACAAGATTGGTTCAATCCAAGGAGCCATTCTTATATTAGTTGGGATCGCAAGCAGCCAGTCAGAAAAGCCTGGGACTGTTGAGAAAGCGGACAAGACACTCAATAATCTGGCACAGTCTGAAAATAATGTACGACAGATGGCTGAGAGCGGTAGATTGGAACCTCTTCTGACACTACTCCTTGAAGGGCCACCTGAGAAAAAGTTATCCATGGCTGCATTCCTGGGTGACCTAGCTCTGAACAATGACGTGAAGGTTAATGTGGCTCGCACTGTGGGCTCATCACTTGTGAATCTCATGAAAAAAGGTGACATAAATTCAAGAGAAGTGTCCTTAAAAGCGCTGAACCAGATTTCATCCTGTGATGCAAGCGCAGAGGTTTTGATAGAAGCCGGAATTCTTCCCCCCTTAGTGAAGGGCCTCTTCACGGTTGGAGTGAAACAGCTTCCCATGCGACTGAAGGAGGTCTCTGCAACTATTCTCTCAAGTGTCGTGAATTCAGGATATGACATTGGTTCTGTTATAATTGGACCTGAAAGGCAGACCCTGGTTTCCGAAAAAACCGTGCACAGCCTCCTCCATCTTATCAGTAACACTGGTCCATCAATCGAGTGCAAACTCCTTCAGGTTCTTGTTGGACTTACCAGTTATGAAACCACTGTTCTGAATGTTGTTGCTGCCATTAAAAGTTCTGGTGCGACCATCAGTTTGGTTCAGTTCATTGAAGCTCCACAACGGGATTTGCGTTTAGCCGCTGTGAAACTTCTGCACAACCTTTCTCCTCACATGGCCCAAGAATTAGCAGATGCCTTATGTGGCTCAACTGGCCAGCTAGGCAGTCTAGTGCAAATTATATCAGAAAATCCTGGAATATCAGAAGAGCAGGCTGCTGCAGTTGGCCTTTTAGCAGAACTCCCGGAAGGAGATTTGGCGCTAACACGGAAAATGCTCAGGGAAGGTGTTTTTGGCCTTATCATATCTGGAGTCAAGAGAATCAGGCAAGGGGAGACTAGGGGGAGCCGTTTTATGACTCCATATCTGGAAGGGCTGGTCCGTTCTCTTGCAAGGGTTACGTATGTGTTGGCTGAGGAGCCTGAGATACGTGCTTTGTGTTGCGAGCAAGATCTTGCATCATTGTTCATTAGCTTGCTCCAGACAAATGGTATCGACAATGTGCAAATAGCTTCAGCTCGAGCTTTGCGGAACCTATCCTCAGAAACCATAAAATTGACAAGAAAGCCAGAGTTGCCACCACCTGGTATGTGTGCATCAATATTCACTTGTTTTAGCAAACCTCCCAACATGTCTGGGTTATGCCCTGTTCATGGGGGTCTGTGTTCTTTGAAAGAGACATTTTGTCTGGTTGAGGGGCAGGCTGTTGAAAAGTTGGTAGCCCTTTTAGATCACACAAACAATAAAGTTGTTGAAGCAGCACTTGCTGCATTATCCACATTGTTAGATGATGGGGTAAACATTGAAGAAGGGGTTCTTGTTTTGCATGACGCTGATGGAACCAAGCCCATTTTCGAGGTTCTGGTGGAGAACCGAACAGAGGACCTACGAAAAAGGGCAGTCTGGGTGGTTGAGAGGCTCTTGCGGACTGATCAAATAGCTTATGACATATCAAATGATCAGAATGTTGGGACAGCGCTCGTTGATGCTTTCCAGCATGGTGACTATCGCACTCGGCAAATTGCTGAGCGAGCTTTGAAGCATGTTGATAGAATCCCAAACTTCTCAGGGATATTCCCCAACAATGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62773.p1 GENE.R_Transcript_62773~~R_Transcript_62773.p1 ORF type:complete len:814 (+),score=161.67,U-box|PF04564.11|9.1e-15,HEAT_2|PF13646.2|0.047,HEAT_2|PF13646.2|28,HEAT_2|PF13646.2|35,HEAT_2|PF13646.2|2.6,HEAT_2|PF13646.2|1.2e+02,HEAT_2|PF13646.2|1.8e-06,Arm|PF00514.19|36,Arm|PF00514.19|6.3e+03,Arm|PF00514.19|4.9e+02,Arm|PF00514.19|4.2e+02,Arm|PF00514.19|8.7,Arm|PF00514.19|1.9e+03,Arm|PF00514.19|2.4e+02,Arm|PF00514.19|0.12,Arm|PF00514.19|0.0013,Arm|PF00514.19|9.9e+03,HEAT|PF02985.18|0.61,HEAT|PF02985.18|3.5e+03,HEAT|PF02985.18|3.1e+02,HEAT|PF02985.18|2e+02,HEAT|PF02985.18|9.9e+03,HEAT|PF02985.18|1.4e+03,HEAT|PF02985.18|1,HEAT|PF02985.18|1.1e+04,zf-Nse|PF11789.4|1.9e-05 R_Transcript_62773:778-3219(+)
MAGSSGGTSEHDSQSDESYQYERFHIEPIFSPFVCPLTKQVMRDPVTIENGNTFEREAIENWFKECEDSGRKPTCPVTSQVLHSTDLNPSIALRNTIEEWTARNEAAKLDMARRTLSSGTSERDILQALKYVEYLSKGSRSNKHAVHNAEIVHLIVDMLRNSSRKVRSKALETLRIIAEQDSDMKEVMGEGGTVRTIVKFLSPEQSTEREEAISLLYELSKSSNLCDKIGSIQGAILILVGIASSQSEKPGTVEKADKTLNNLAQSENNVRQMAESGRLEPLLTLLLEGPPEKKLSMAAFLGDLALNNDVKVNVARTVGSSLVNLMKKGDINSREVSLKALNQISSCDASAEVLIEAGILPPLVKGLFTVGVKQLPMRLKEVSATILSSVVNSGYDIGSVIIGPERQTLVSEKTVHSLLHLISNTGPSIECKLLQVLVGLTSYETTVLNVVAAIKSSGATISLVQFIEAPQRDLRLAAVKLLHNLSPHMAQELADALCGSTGQLGSLVQIISENPGISEEQAAAVGLLAELPEGDLALTRKMLREGVFGLIISGVKRIRQGETRGSRFMTPYLEGLVRSLARVTYVLAEEPEIRALCCEQDLASLFISLLQTNGIDNVQIASARALRNLSSETIKLTRKPELPPPGMCASIFTCFSKPPNMSGLCPVHGGLCSLKETFCLVEGQAVEKLVALLDHTNNKVVEAALAALSTLLDDGVNIEEGVLVLHDADGTKPIFEVLVENRTEDLRKRAVWVVERLLRTDQIAYDISNDQNVGTALVDAFQHGDYRTRQIAERALKHVDRIPNFSGIFPNNG*

Click here to download the sequence:
Link to NCBI Protein BLAST