Transcript Information: R_Transcript_62816.p1


Annotated TAIR IDAT5G24300.1
Annotated Gene NameGlycogen/starch synthases, ADP-glucose type
Annotated Gene Symbol(s)SSI1, SSI, ATSS1
Annotation TypeOrtholog
Chromosome Positionchr5:8266934-8270860 | Forward length=652
E-Value1.3e-317
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2479618221891
Replicate 22.5450061110664
Replicate 33.7761409855476
Condition 2: 8 Hour
Replicate 13.9177383915592
Replicate 25.2581952450788
Replicate 35.9625290643938
Condition 3: 24 Hour
Replicate 14.6750443809143
Replicate 24.0902480124343
Replicate 35.3857018805335


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62816.p1 GENE.R_Transcript_62816~~R_Transcript_62816.p1 ORF type:5prime_partial len:825 (+),score=145.36,Glyco_transf_5|PF08323.7|6.8e-65,Glycos_transf_1|PF00534.16|1.6e-16,Glyco_trans_1_4|PF13692.2|1e-06 R_Transcript_62816:2-2476(+)
CGTTATTATGCGTTTATAGAAGAGGGAATAGAGGAGCTTAGGAACAAGTGCCATTCACCATCCCAGCGGTGCTCCTGTCTGCATTATACTGCTGTTTTACTTCACTGGATCCATCATTGGTTTCCTACCTTTTTCAAGTATCAGTTTATCACAAATTTCCTTTTTTCTCTATACTTTCTTTCTTTTCTTCTTATAATTGCCATTCGCCCCTGTTCTTTCTTTCTTTCTTGCTCATTTCTCCTCCATATGATGGATTCTTTATTACTTCACTCTTCTTCCCCCGTCATAAAGTGTCTCAATCGATCTGCTAAATTCAACTCACTAACCAACAACTCACAGTCTTTTATTACACCCCAAATCAATCAAGTTCACTTTGCTTATTTTTGGAGACATGGATGGTCTTTTTCACTTACTACTACCAATACAACAACAACAACAACACAAAGACAGTCCTTTTCTGATGGCCATGAAGGTGAACTTTCCAGTTCTAGAGATGGGTCTTTTGCTAGTCTTGGCCAGCAACATCAAGAACTTGAAGATAAAGAAGAAGAAGATGATGAAAAGGAAGGGCAAAAAGGTCATTTGATTGGCCCTCTTAAAGATACTTCTGGCTCCATTGTTGGGTTTCACTTGTATGCTCGACCTCAATCTCAACCTCATTCTGATGGAAGTAATCATCTTAACGCTAATGTTAATGGAGCCCTGGATACACAACGAGTGCAGCCAGAAGTTGAGGAAGAAGAGGATGTTGAAGAGGAAGAGCATGAAGTGAAGGAAGAAAGTGTCAGTGAAGGAGAGGAGAAACTCCCTACCAGACTAGCAAGCAGTATAATTTTTGATGGATCACAAGAAGAAAGCGAGATAGAAGAAGCTATAAAGGAGGTGCTGGAAGAAAGTGATGTTGAGGGACCGGAGAAAATCCCTACGAGAGTAACTCGCAGCATCGTCTTTGTGACTTCAGAGGCTGCACCATATTCCAAGACAGGGGGTCTAGGAGATGTTTGTGGGTCTTTGCCTATATCACTAGCTGAACGAGGACATCGTGTGATGGTGGTCTCCCCTAGATATTTACATGGTACTGCAGCTGATAAAAGATATGCTGCTGCATTTGATGCCGACTGCCGCATCAAGGTTAATTGCTTTGGAGGAGCACAAGAAGTCGCCTTCTTCCATGAGTACAGAGCTGGTGTTGATTGGGTCTTTGTGGATCATCCATCATATCACCGTCCTGGAAATCCGTACGGCGACAGTTTTGGTGCTTTCGGTGATAATCAGTTCCGGTTCACCTTACTTTGTCATGCAGCATGTGAAGCCCCTTTGGTCCTTCCACTAGGAGGGTACACCTACGGTGAGAAGTGCTTGTTCCTTGTTAATGATTGGCACGCAGGCCTCGTACCAGTACTTCTGGCTGCCAAGTATCGTCCTTTTGGAGTATACAAGGATGCAAGGACTGTACTTGTCATACACAACCTTTCTCATCAAGGTGTGGAGCCTGCAGTCACATACGATAACCTAGGACTTCCCCCACAGTGGTATGGGACACTGGAATGGGTGTTTCCAGAATGGGCAAGAGCACATGCGCTTGATAAGGGTGAAGCTGTCAACATTCTCAAGGGAGCCATCGTTACATCTGATAGAATACTTACAGTTAGCCAGGGATATTCATGGGAAATAACAACTGTAGAAGGTGGGTACGGTTTGTATGAGTTACTAAGCAGTCGAAAGTTCGTATTGAATGGTATCGTAAATGGCATTGATACTTCTGATTGGGACCCATCTACTGATGAACATATTCCTGCTCATTACTCCATTGACGATCTTTCTGGAAAGGCTGAATGCAAGACTGAACTACAAAAGGAACTCGGTCTTCCTCTGAAACCTGATTGCCCACTGATTGGATTCATTGGGAGGCTTGATTACCAGAAAGGCATTGATCTAATTCAGGGAGCCATTCCAGAGCTTATGCAAGAGGATGTGCAATTTGTTATGTTGGGGTCGGGGGACTCTCGGTATGAAAGTTGGATGAGGGCAACAGAGGCAACATATAAGGATAAATTCCGTGGTTGGGTTGGATTTAATGTCCCAGTTTCTCATCGGATAACTGCAGGCTGTGACATTCTTTTGATGCCATCAAGATTTGAACCTTGCGGATTGAATCAGTTGTATGCAATGAGATATGGAACTATACCAGTTGTCCATGCCACTGGTGGACTCCGGGACACTGTTGAGACTTACAATCCATATGCAGTTGGAGCCGATGGAAGTGGTTCTGGTACTGGATGGGCATTTTCTCCATTAGCCAAAGAAAGCATGTTATCGGCTCTGAGAAATGCTCTGACAACATATAAGGAGTACAAATCTTCTTGGGTGGGATTGATGAAGAGAGGTATGGGACGCGATTTTACGTGGGACAGTGCTGCAGCTCAGTATGAGCAGGTCTTCGAATGGGCTTTCACCGACCCTCCATACTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62816.p1 GENE.R_Transcript_62816~~R_Transcript_62816.p1 ORF type:5prime_partial len:825 (+),score=145.36,Glyco_transf_5|PF08323.7|6.8e-65,Glycos_transf_1|PF00534.16|1.6e-16,Glyco_trans_1_4|PF13692.2|1e-06 R_Transcript_62816:2-2476(+)
RYYAFIEEGIEELRNKCHSPSQRCSCLHYTAVLLHWIHHWFPTFFKYQFITNFLFSLYFLSFLLIIAIRPCSFFLSCSFLLHMMDSLLLHSSSPVIKCLNRSAKFNSLTNNSQSFITPQINQVHFAYFWRHGWSFSLTTTNTTTTTTQRQSFSDGHEGELSSSRDGSFASLGQQHQELEDKEEEDDEKEGQKGHLIGPLKDTSGSIVGFHLYARPQSQPHSDGSNHLNANVNGALDTQRVQPEVEEEEDVEEEEHEVKEESVSEGEEKLPTRLASSIIFDGSQEESEIEEAIKEVLEESDVEGPEKIPTRVTRSIVFVTSEAAPYSKTGGLGDVCGSLPISLAERGHRVMVVSPRYLHGTAADKRYAAAFDADCRIKVNCFGGAQEVAFFHEYRAGVDWVFVDHPSYHRPGNPYGDSFGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPVLLAAKYRPFGVYKDARTVLVIHNLSHQGVEPAVTYDNLGLPPQWYGTLEWVFPEWARAHALDKGEAVNILKGAIVTSDRILTVSQGYSWEITTVEGGYGLYELLSSRKFVLNGIVNGIDTSDWDPSTDEHIPAHYSIDDLSGKAECKTELQKELGLPLKPDCPLIGFIGRLDYQKGIDLIQGAIPELMQEDVQFVMLGSGDSRYESWMRATEATYKDKFRGWVGFNVPVSHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVETYNPYAVGADGSGSGTGWAFSPLAKESMLSALRNALTTYKEYKSSWVGLMKRGMGRDFTWDSAAAQYEQVFEWAFTDPPYC*

Click here to download the sequence:
Link to NCBI Protein BLAST