Transcript Information: R_Transcript_62837.p1


Annotated TAIR IDAT3G61360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22704630-22706126 | Reverse length=498
E-Value3.3E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0284855232094
Replicate 23.5267223355501
Replicate 33.8923558024712
Condition 2: 8 Hour
Replicate 13.7302684880569
Replicate 24.1926653452223
Replicate 35.1760452159697
Condition 3: 24 Hour
Replicate 14.0803915189865
Replicate 24.0061310094213
Replicate 33.6764503966273


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62837.p1 GENE.R_Transcript_62837~~R_Transcript_62837.p1 ORF type:complete len:512 (+),score=89.81,PPR_2|PF13041.2|27,PPR_2|PF13041.2|71,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|9.5e-10,PPR_2|PF13041.2|0.48,PPR_2|PF13041.2|6.7e-12,PPR_2|PF13041.2|0.86,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.023,PPR|PF01535.16|87,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.0037,PPR|PF01535.16|62,PPR|PF01535.16|0.00021,PPR|PF01535.16|24,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|1,PPR|PF01535.16|80,PPR|PF01535.16|0.038,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|4.2e-06,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.0078,PPR_1|PF12854.3|10,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.011,PPR_3|PF13812.2|9.8e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|80,PPR_3|PF13812.2|7.5,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|0.78 R_Transcript_62837:456-1991(+)
ATGCTTGCTTTCTTCCAGCCGAGGAGTGTCAGACAGTTGATTAAACAACACCAGAACACCACATATGTTGCCTTTGCTTTCAAGTCATTCTGCCAATCCTGCCTTTCTGTGGATAGAAAACAAGAAGTTGAGAGGATTACAAAAATCATAAATGACCATCCATTTCCTGACTTACCACTTCTGCCTACACTTCTCCAGCATATCAGTCCTTCAAACCTTTCTGTTACATTTGTGGAGGATGTTCTTGGGCGTTTATTCGCAGCCCATAGTAATGGGCTTAAAGCATGTGAGTTCTTCAAATTCACCCTCCAATATCCCCAATTGCATCCAACTTCAGATGCTTTTGAGAAGACACTGCACATTCTTACACGAATGCGGTATTTTGATGAAGCATGGCAATTGATGGAGGAAATCGGTAGAATGGACCAGTCTTTGCTGACCCTCAAGTCAATGAACATTCTTCTGTCTAAAATTGCTAAATTCCAGTCCTATGAAGATACACTTGAGGCATTTGAGAGGATGGAGAAGAACATATTTGTCGGAAGAACATTCGGAACACACGAGTTCAATGTATTGCTTCGCGTATTTTGCACCCAAAGGCAGATGAAGGAAGCAAAATCAGTATTCAACAAGATGTACTCACGTTTCCCGCCTAACACAAAGACCATGAACATTCTGCTCTTGGGTTTCAAGGAATCTGGTGATATTGCTGCAATTGAACTATTCTACCATGAGCTAGTGAAAAGAGGTTTCAAGCCTAATAATGTGACTTATAACATCAGAATTGATGCTTACTGCAAGAGAGCTTGCTTTGGGGATGGATTGCGGCTTTTGCAAGATATGGAACGGATGAATTGCTTGCCAACACTAGAAACAATTACAACTTTAATTCATGGAGCTGGCGTTGCGAGAAATGTGACGCGGACATGGGAGTTGTTCAATGAACTGCCTGCAAGAAACCTGTACCCTGACATTGGGGCTTATAATGCTATGATAAGCGTTCTAGTGAAATGTAGACAGATAGACGATGCCGTTAGTTTGATGACTGAGATGGAAGAGAAGTGTATGGAGCCGGATGGCATGACTTACCATACACTGTTCCATGGCCTGATGAAGTCAAATGGCATTGAGGGTGTCACAGGACTCTACCAAAAAATGGTTGCTTCAAACTTCATTCCAAAGACACGTACGGTTGTGATGCTAATGAAATTCTTTTGTGGGAACCGTCGTGTCGATCTGGGTCTGAATTTGTGGGAATACTTGATGGAAAAGGGTTATTGCCCTCATGATCATGCATTGGCTCTTCTCGTGACAGGGTTGTGTTCGCAAGGAAGGGTGCAAGAAGCTTTCGAATGTGCCAAGCAGATGTTGAGCAGAGGGAAGCATATGAGTGAACCAGTATTTCACATGTTGGAGAGGTTTTTGCAGGAGGCAGGTGAGGCTGACAAACTAAGAAACCTTGATGAAATGATAAGGAAACTTGGTAGTGTTTATCCCCCATCAAGAGGACATGCTCTTGGACTTTCTCCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62837.p1 GENE.R_Transcript_62837~~R_Transcript_62837.p1 ORF type:complete len:512 (+),score=89.81,PPR_2|PF13041.2|27,PPR_2|PF13041.2|71,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|9.5e-10,PPR_2|PF13041.2|0.48,PPR_2|PF13041.2|6.7e-12,PPR_2|PF13041.2|0.86,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.023,PPR|PF01535.16|87,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.0037,PPR|PF01535.16|62,PPR|PF01535.16|0.00021,PPR|PF01535.16|24,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|1,PPR|PF01535.16|80,PPR|PF01535.16|0.038,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|4.2e-06,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.0078,PPR_1|PF12854.3|10,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.011,PPR_3|PF13812.2|9.8e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|80,PPR_3|PF13812.2|7.5,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|0.78 R_Transcript_62837:456-1991(+)
MLAFFQPRSVRQLIKQHQNTTYVAFAFKSFCQSCLSVDRKQEVERITKIINDHPFPDLPLLPTLLQHISPSNLSVTFVEDVLGRLFAAHSNGLKACEFFKFTLQYPQLHPTSDAFEKTLHILTRMRYFDEAWQLMEEIGRMDQSLLTLKSMNILLSKIAKFQSYEDTLEAFERMEKNIFVGRTFGTHEFNVLLRVFCTQRQMKEAKSVFNKMYSRFPPNTKTMNILLLGFKESGDIAAIELFYHELVKRGFKPNNVTYNIRIDAYCKRACFGDGLRLLQDMERMNCLPTLETITTLIHGAGVARNVTRTWELFNELPARNLYPDIGAYNAMISVLVKCRQIDDAVSLMTEMEEKCMEPDGMTYHTLFHGLMKSNGIEGVTGLYQKMVASNFIPKTRTVVMLMKFFCGNRRVDLGLNLWEYLMEKGYCPHDHALALLVTGLCSQGRVQEAFECAKQMLSRGKHMSEPVFHMLERFLQEAGEADKLRNLDEMIRKLGSVYPPSRGHALGLSPS*

Click here to download the sequence:
Link to NCBI Protein BLAST