Transcript Information: R_Transcript_62896.p1


Annotated TAIR IDAT3G44680.1
Annotated Gene Namehistone deacetylase 9
Annotated Gene Symbol(s)HDA9, HDA09
Annotation TypeOrtholog
Chromosome Positionchr3:16226769-16229752 | Reverse length=426
E-Value2.5E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30170183396229
Replicate 20.34704628787269
Replicate 30.66259158335978
Condition 2: 8 Hour
Replicate 10.20236252022517
Replicate 20.5544020291203
Replicate 31.1250998318422
Condition 3: 24 Hour
Replicate 10.28460091604592
Replicate 20
Replicate 30.81400554620693


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62896.p1 GENE.R_Transcript_62896~~R_Transcript_62896.p1 ORF type:complete len:242 (+),score=32.45,Hist_deacetyl|PF00850.15|2.3e-50 R_Transcript_62896:280-1005(+)
ATGCGATCCAAAGATAGAATCTCTTACTTTTACGACGGAGATGTAGGTAGCGTTTACTTCGGCCCTAACCATCCGATGAAGCCTCACCGTCTCTGTATGACTCACCACCTCGTTCTCTCCTACGATCTCCACAGCAAGATGGAGATTTATAGACCTCACAAGGCGTATCCGGTGGAGTTAGCTCAGTTTCATTCAGCTGATTATGTGGAGTTCTTGCATCGAATTACACCGGACACTCAGCATCTCTTCATGACTGAGATGGCCAAATATAATCTTGGAGAGGATTGCCCAGTTTTTGATAATCTTTTTGAGTTTTGCCAAATTTATGCCGGTGGAACCATTGATGCTGCCCGTAGGTTGAACAATAAACTTTGTGACATTGCTATAAATTGGGCTGGTGGATTGCACCATGCTAAGAAATGCGAGGCATCTGGATTTTGTTACATAAATGACTTGGTTTTGGGGATTTTGGAACTGTTGAAGTATCATGCCCGTGTTCTTTACATAGATATTGATGTGCATCATGGTGATGGTGTTGAAGAAGCATTCTATTTCACTGATAGAGTGATGACTGTCAGTTTCCATAAATTTGGAGATTTGTTCTTTCCTGGAACAGGAGATGTCAAGGTGAGATCTTCAGTTCGCTTTCATTTTGCAAATATGGAATTGATTCTCTTTCGCAGTTCTCTGGCGATATCTACCAGATTTGTGAATTTGCATTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62896.p1 GENE.R_Transcript_62896~~R_Transcript_62896.p1 ORF type:complete len:242 (+),score=32.45,Hist_deacetyl|PF00850.15|2.3e-50 R_Transcript_62896:280-1005(+)
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHSKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFMTEMAKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKVRSSVRFHFANMELILFRSSLAISTRFVNLHY*

Click here to download the sequence:
Link to NCBI Protein BLAST