Transcript Information: R_Transcript_62920.p1


Annotated TAIR IDAT3G01470.1
Annotated Gene Namehomeobox 1
Annotated Gene Symbol(s)ATHB-1, ATHB1, HD-ZIP-1, HAT5, HB-1
Annotation TypeHomolog
Chromosome Positionchr3:182648-184034 | Reverse length=272
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1214.71415907512
Replicate 2152.98364472935
Replicate 3209.31739725671
Condition 2: 8 Hour
Replicate 188.339463290238
Replicate 2107.616682218
Replicate 3120.5831376902
Condition 3: 24 Hour
Replicate 1153.24133517008
Replicate 2140.43666615131
Replicate 3148.49608833513


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62920.p1 GENE.R_Transcript_62920~~R_Transcript_62920.p1 ORF type:complete len:283 (+),score=71.56,Homeobox|PF00046.25|5.7e-17,Homeobox|PF00046.25|9.5e+02,HALZ|PF02183.14|2.7e-16 R_Transcript_62920:1587-2435(+)
ATGGTAAGCTTCGAAGATGTGTGTGGAGGGAAGAGATCATCGTTCTTCCGATCATACGATCAGGAGGAAACCGGTGACGAGGATTTTGATGATTACTTTCATCAGCCTGAGAAAAAGAGAAGGTTGACTGTTGAGCAAGTCCAGTTCTTGGAGAAGAGCTTTGAGACTGAGAACAAGCTTGAACCTGAAAGGAAAATTCAGCTTGCCAAGGACCTTGGCTTGCAGCCTAGGCAAGTTGCTATATGGTTCCAAAACAGAAGGGCTAGGTGGAAAACTAAACAACTTGAGAAGGATTTTGATACTTTGCAAGCTAGCTTTAACAGCCTCAAAAGCGACTATGATCATCTCCTTAAGGAGAAGGATAAGCTCCGAGCTGAGGTTGCTCATCTGACAGACAAGCTGCGTCTGAAGGAGAAAGAGCAAGGAGATCAGTCTGAACCATCCAACAGTACAAATGATGAATGGAAAACAGGACAGCTAGAGCCTGTAATCGATTCAGCTTCTGAGATTGAGGATCAGCAAGTTTCGGTCCTAGCTAGTAGTAAGCAGGAAGAGCTAACCTCAGCCAAAAGCGATGTGCTAGACTCCGAGAGTCCACACTATGCGGAAGGAGACCATTCTTCCTTTGGTGACGCTTCGTATGCTTTTGAAGCAGACCACTCTGATATTTCTCAAGATGATGAAGATTACTTGAACAACACCATCCTGCCTTCATCCCATGTCTTTCCGAAGATTGAGGATGTCAATTATTCTGACCCTCCCGTCAACAACTCTTGCAACTTTGGACTCCCGAATGAAGATCATACTTCTCTATTCTGGCCTTATTGGGACATCAATCTCAAAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62920.p1 GENE.R_Transcript_62920~~R_Transcript_62920.p1 ORF type:complete len:283 (+),score=71.56,Homeobox|PF00046.25|5.7e-17,Homeobox|PF00046.25|9.5e+02,HALZ|PF02183.14|2.7e-16 R_Transcript_62920:1587-2435(+)
MVSFEDVCGGKRSSFFRSYDQEETGDEDFDDYFHQPEKKRRLTVEQVQFLEKSFETENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDFDTLQASFNSLKSDYDHLLKEKDKLRAEVAHLTDKLRLKEKEQGDQSEPSNSTNDEWKTGQLEPVIDSASEIEDQQVSVLASSKQEELTSAKSDVLDSESPHYAEGDHSSFGDASYAFEADHSDISQDDEDYLNNTILPSSHVFPKIEDVNYSDPPVNNSCNFGLPNEDHTSLFWPYWDINLKM*

Click here to download the sequence:
Link to NCBI Protein BLAST