Transcript Information: R_Transcript_62936.p1


Annotated TAIR IDAT5G03740.1
Annotated Gene Namehistone deacetylase 2C
Annotated Gene Symbol(s)HD2C, HDT3
Annotation TypeHomolog
Chromosome Positionchr5:981994-983961 | Forward length=294
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.375333677807
Replicate 234.075962970713
Replicate 346.627102483971
Condition 2: 8 Hour
Replicate 148.904828624143
Replicate 244.477382460063
Replicate 345.77578306726
Condition 3: 24 Hour
Replicate 152.439144378034
Replicate 252.848256959116
Replicate 353.642817224445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62936.p1 GENE.R_Transcript_62936~~R_Transcript_62936.p1 ORF type:5prime_partial len:366 (+),score=135.22 R_Transcript_62936:3-1100(+)
CTTTCTCGAACCCTTCATTTTTTTATAGTTCTCTCACATGACACTCCACTCTCTGACAGGTTGCAACAAAATAACACTCCCTCTTCTCTGATCGTTTCATTTCCTTCAGTCAGTTCGAGCCCTACTTGCCCGCCTTTCGCTCTCTCTTTGATCATGATGCAGTTTTGGGGTGCTGAGGTAAAACATGGAAGCACCCTAAAGGTGCAACCTGGTGATGACAAACTTGTGCACCTGTCACAGGCCTGTCTTGCAGACATTAAGAAGGACAAAGGAAATGAATTTATTCGTCTCTATGCTCAGAAGGGTGACCAGAAGCTTGTCATTGGGATTCTTTCCCCTGAAAAATTCCCCCATGTAAATCTTGACCTCATATTTGAAGATGAGTTTGAGCTATCTCATGACTGGAAACATGGAAATGTGCACTTTGCTGGATATAAAGCTGATAACCCAGATCCAATGCATGAAGAATATGAATCTGAATCTGATGAGGAGCTTGAGGTGCGTGATTCTGTTGAGGTTCTGAACAATGGAAAACCTGAAGCAAAAGAGTTGAAGACGGCTGGTAATAAGGCCAGTTCTAGTGTGAAGCCTGAAAATGCAGAAGGTAAGCTGAAGGTGACGATTGTGGAACCTGCCAAGAAGAATGAAGAGGATGAGGAATCTGATGATGATGATGAGGACGATGAGGATGAATCTGATGAGGATGAAGAAGAAGAGGATGAGGATATGCTGAGTGATGAAGGGGGAAGTGAGGACGATGATAGTAGTGATGAGGAAGAGGTGAGTGATGAGGAGACACCGAAAAAGCCTGAATCAAGCAAGAAGCGGCCTGCACAATCAACATCAAAGACTCCTGTTCCTGACAAGAAGGCAAAATTCTCTACTCCACAACAGAAGACTGATGGCAAGAAAGTTAGCGGCCACATTGCTACTCCTCATCCTGCAAAGCAGGCTGCAAAAACACCTGCTAATGCTGACAGGTCCAACAAGCAGACGCCCAAAGCTGGTGGATCCGTTTCTTGCAGTTCTTGCAACAGGTCTTTTGGTTCTGAACAAGCTCTACAATCTCATTCTAAGGCCAAGCATGGTGCTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62936.p1 GENE.R_Transcript_62936~~R_Transcript_62936.p1 ORF type:5prime_partial len:366 (+),score=135.22 R_Transcript_62936:3-1100(+)
LSRTLHFFIVLSHDTPLSDRLQQNNTPSSLIVSFPSVSSSPTCPPFALSLIMMQFWGAEVKHGSTLKVQPGDDKLVHLSQACLADIKKDKGNEFIRLYAQKGDQKLVIGILSPEKFPHVNLDLIFEDEFELSHDWKHGNVHFAGYKADNPDPMHEEYESESDEELEVRDSVEVLNNGKPEAKELKTAGNKASSSVKPENAEGKLKVTIVEPAKKNEEDEESDDDDEDDEDESDEDEEEEDEDMLSDEGGSEDDDSSDEEEVSDEETPKKPESSKKRPAQSTSKTPVPDKKAKFSTPQQKTDGKKVSGHIATPHPAKQAAKTPANADRSNKQTPKAGGSVSCSSCNRSFGSEQALQSHSKAKHGAQ*

Click here to download the sequence:
Link to NCBI Protein BLAST