Transcript Information: R_Transcript_62945.p1


Annotated TAIR IDAT5G03740.1
Annotated Gene Namehistone deacetylase 2C
Annotated Gene Symbol(s)HD2C, HDT3
Annotation TypeOrtholog
Chromosome Positionchr5:981994-983961 | Forward length=294
E-Value8.9E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.857276647624
Replicate 236.642858534745
Replicate 341.357644043464
Condition 2: 8 Hour
Replicate 136.56108601712
Replicate 240.739688833941
Replicate 343.414674168761
Condition 3: 24 Hour
Replicate 151.828036042817
Replicate 244.533495348919
Replicate 346.773725084328


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62945.p1 GENE.R_Transcript_62945~~R_Transcript_62945.p1 ORF type:5prime_partial len:365 (+),score=135.15 R_Transcript_62945:1-1095(+)
CGATCACCACACCCGAAGAGGCCAAGTAATATATTTCTTTCACATGACACTCCACTCTTTGACAACATCATAACACTCACTTCTCATCTCGTTTCATTTCCTTCAGTCAGTTCGAGCCCTACTTGCCCGCCTTTCGCTCTCTCTTTGATCATGATGCAGTTTTGGGGTGCTGAGGTAAAACATGGAAGCACCCTAAAGGTGCAACCTGGTGATGACAAACTTGTGCACCTGTCACAGGCCTGTCTTGCAGACATTAAGAAGGACAAAGGAAATGAATTTATTCGTCTCTATGCTCAGAAGGGTGACCAGAAGCTTGTCATTGGGATTCTTTCCCCTGAAAAATTCCCCCATGTAAATCTTGACCTCATATTTGAAGATGAGTTTGAGCTATCTCATGACTGGAAACATGGAAATGTGCACTTTGCTGGATATAAAGCTGATAACCCAGATCCAATGCATGAAGAATATGAATCTGAATCTGATGAGGAGCTTGAGGTGCGTGATTCTGTTGAGGTTCTGAACAATGGAAAACCTGAAGCAAAAGAGTTGAAGACGGCTGGTAATAAGGCCAGTTCTAGTGTGAAGCCTGAAAATGCAGAAGGTAAGCTGAAGGTGACGATTGTGGAACCTGCCAAGAAGAATGAAGAGGATGAGGAATCTGATGATGATGATGAGGACGATGAGGATGAATCTGATGAGGATGAAGAAGAAGAGGATGAGGATATGCTGAGTGATGAAGGGGGAAGTGAGGACGATGATAGTAGTGATGAGGAAGAGGTGAGTGATGAGGAGACACCGAAAAAGCCTGAATCAAGCAAGAAGCGGCCTGCACAATCAACATCAAAGACTCCTGTTCCTGACAAGAAGGCAAAATTCTCTACTCCACAACAGAAGACTGATGGCAAGAAAGTTAGCGGCCACATTGCTACTCCTCATCCTGCAAAGCAGGCTGCAAAAACACCATCTAATGCTGACAAGTCCAACAAGCAGACGCCCAAAGCTGGTGGATCCGTTTCTTGCAGTTCTTGCAACAGGTCTTTTGGTTCTGAACAAGCTCTACAATCTCATTCTAAGGCCAAGCATGGTGCTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62945.p1 GENE.R_Transcript_62945~~R_Transcript_62945.p1 ORF type:5prime_partial len:365 (+),score=135.15 R_Transcript_62945:1-1095(+)
RSPHPKRPSNIFLSHDTPLFDNIITLTSHLVSFPSVSSSPTCPPFALSLIMMQFWGAEVKHGSTLKVQPGDDKLVHLSQACLADIKKDKGNEFIRLYAQKGDQKLVIGILSPEKFPHVNLDLIFEDEFELSHDWKHGNVHFAGYKADNPDPMHEEYESESDEELEVRDSVEVLNNGKPEAKELKTAGNKASSSVKPENAEGKLKVTIVEPAKKNEEDEESDDDDEDDEDESDEDEEEEDEDMLSDEGGSEDDDSSDEEEVSDEETPKKPESSKKRPAQSTSKTPVPDKKAKFSTPQQKTDGKKVSGHIATPHPAKQAAKTPSNADKSNKQTPKAGGSVSCSSCNRSFGSEQALQSHSKAKHGAQ*

Click here to download the sequence:
Link to NCBI Protein BLAST