Transcript Information: R_Transcript_62999.p1


Annotated TAIR IDAT5G12180.1
Annotated Gene Namecalcium-dependent protein kinase 17
Annotated Gene Symbol(s)CPK17
Annotation TypeHomolog
Chromosome Positionchr5:3937136-3939323 | Forward length=528
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5666705313818
Replicate 23.4993834027163
Replicate 33.2911979304817
Condition 2: 8 Hour
Replicate 12.533020511784
Replicate 24.3693677160937
Replicate 32.816629234198
Condition 3: 24 Hour
Replicate 13.6943597837685
Replicate 24.5631570118436
Replicate 31.5094968749584


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_62999.p1 GENE.R_Transcript_62999~~R_Transcript_62999.p1 ORF type:complete len:174 (+),score=29.65,EF-hand_6|PF13405.2|0.0002,EF-hand_6|PF13405.2|5,EF-hand_6|PF13405.2|60,EF-hand_6|PF13405.2|7.2,EF-hand_6|PF13405.2|4.2,EF-hand_1|PF00036.28|0.00073,EF-hand_1|PF00036.28|0.0055,EF-hand_1|PF00036.28|1.7e+03,EF-hand_1|PF00036.28|12,EF-hand_1|PF00036.28|8.4e+02,EF-hand_7|PF13499.2|2.4e-05,EF-hand_7|PF13499.2|30,EF-hand_7|PF13499.2|4.2,EF-hand_7|PF13499.2|9.6 R_Transcript_62999:53-574(+)
ATGGAGAACTCAGCGATTCTCAGGGAGTGGTTCGACCGAGTTGACTCTGATAAAACCGGTACCATCACTGCTTCTCAGCTCAAGAATGCCTTTGCCGTTGGAAACCTCGATTTCCCACTTTCTGTTGTTCAGCAAATGATCAGGATGTATGATTTTGACAATAATGGAACTATGAGCTTTGGAGGTTCAGCAAGCTTTCTCAGATCAAGAAAGACCTTGCAATACATATCTCAGCTGTTTTCTTTTGATGAAAATTTTGACAGAGGCCGTGGATACCTTGGACATGATGAAGTTTATCAGGCAATAGTCAAGCTTGGATTTTCACTTGATACGCCTGCCTTTTACACGACTTGTGAGAGTTTTGACCGAGGAAGAGATGGACTGTTCCAACTGGATGAGTTCATATCTTTGTGCATATTTCTACAATCAGCTCGCAATCTTTTCAACTCTTTTGATACGGCTAAGGAAGGCAGAGTGACGCTTGATCTGAATCAATTTATTTACTGCACTGCCAAAGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_62999.p1 GENE.R_Transcript_62999~~R_Transcript_62999.p1 ORF type:complete len:174 (+),score=29.65,EF-hand_6|PF13405.2|0.0002,EF-hand_6|PF13405.2|5,EF-hand_6|PF13405.2|60,EF-hand_6|PF13405.2|7.2,EF-hand_6|PF13405.2|4.2,EF-hand_1|PF00036.28|0.00073,EF-hand_1|PF00036.28|0.0055,EF-hand_1|PF00036.28|1.7e+03,EF-hand_1|PF00036.28|12,EF-hand_1|PF00036.28|8.4e+02,EF-hand_7|PF13499.2|2.4e-05,EF-hand_7|PF13499.2|30,EF-hand_7|PF13499.2|4.2,EF-hand_7|PF13499.2|9.6 R_Transcript_62999:53-574(+)
MENSAILREWFDRVDSDKTGTITASQLKNAFAVGNLDFPLSVVQQMIRMYDFDNNGTMSFGGSASFLRSRKTLQYISQLFSFDENFDRGRGYLGHDEVYQAIVKLGFSLDTPAFYTTCESFDRGRDGLFQLDEFISLCIFLQSARNLFNSFDTAKEGRVTLDLNQFIYCTAKA*

Click here to download the sequence:
Link to NCBI Protein BLAST