Transcript Information: R_Transcript_63000.p1


Annotated TAIR IDAT5G23580.1
Annotated Gene Namecalmodulin-like domain protein kinase 9
Annotated Gene Symbol(s)CDPK9, ATCDPK9, CPK12, ATCPK12
Annotation TypeHomolog
Chromosome Positionchr5:7950388-7952433 | Reverse length=490
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.929180676259
Replicate 211.497974037497
Replicate 316.361955425823
Condition 2: 8 Hour
Replicate 112.680180061966
Replicate 214.374852612191
Replicate 315.018296882344
Condition 3: 24 Hour
Replicate 115.715165661821
Replicate 215.097349835812
Replicate 315.764358732825


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63000.p1 GENE.R_Transcript_63000~~R_Transcript_63000.p1 ORF type:complete len:168 (+),score=30.49,EF-hand_1|PF00036.28|0.0007,EF-hand_1|PF00036.28|1.4e-05,EF-hand_1|PF00036.28|1.8e+03,EF-hand_1|PF00036.28|1.2,EF-hand_1|PF00036.28|8e+02,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|0.075,EF-hand_6|PF13405.2|2.5e+02,EF-hand_6|PF13405.2|0.58,EF-hand_6|PF13405.2|4,EF-hand_7|PF13499.2|3.7e-07,EF-hand_7|PF13499.2|1.4e+03,EF-hand_7|PF13499.2|0.22,EF-hand_8|PF13833.2|0.0033,EF-hand_8|PF13833.2|2.5e+03,EF-hand_8|PF13833.2|3.8e+02,EF-hand_8|PF13833.2|1.9 R_Transcript_63000:57-560(+)
ATGGAGAACTCAGCGATTCTCAGGGAGTGGTTCGACCGAGTTGACTCTGATAAAACCGGTACCATCACTGCTTCTCAGCTCAAGAATGCCTTTGCCGTTGGAAACCTCGATTTCCCACTTTCTGTTGTTCAGCAAATGATCAGGATGTATGATTTCGACAATAGTGGAACTATGAGCTTTGGAGAGTTTGTTGCCCTTAACAAATTCCTTCTAAAGGTTCAGCAGGCTTTCTCAGATCAAGAAAGAGGCCGTGGATACCTTGGACATGATGAAGTTTATCAGGCAATAGTCAAACTTGGATTTTCACTTGATACACCTGCCTTTTACACAGCTTGTGAGAGTTTTGACCGAGAAAGAGATGGACAGTTCCAACTGGATGAGCTCATATCATTGTGCATATTTCTACAATCAGCTCGCAATCTTTTCAACTCTTTTGATACGGCTAAGGAAGGCAGAGTGACGCTTGATCTGAATCAATTTATTTACTGCACTGCCAAAGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63000.p1 GENE.R_Transcript_63000~~R_Transcript_63000.p1 ORF type:complete len:168 (+),score=30.49,EF-hand_1|PF00036.28|0.0007,EF-hand_1|PF00036.28|1.4e-05,EF-hand_1|PF00036.28|1.8e+03,EF-hand_1|PF00036.28|1.2,EF-hand_1|PF00036.28|8e+02,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|0.075,EF-hand_6|PF13405.2|2.5e+02,EF-hand_6|PF13405.2|0.58,EF-hand_6|PF13405.2|4,EF-hand_7|PF13499.2|3.7e-07,EF-hand_7|PF13499.2|1.4e+03,EF-hand_7|PF13499.2|0.22,EF-hand_8|PF13833.2|0.0033,EF-hand_8|PF13833.2|2.5e+03,EF-hand_8|PF13833.2|3.8e+02,EF-hand_8|PF13833.2|1.9 R_Transcript_63000:57-560(+)
MENSAILREWFDRVDSDKTGTITASQLKNAFAVGNLDFPLSVVQQMIRMYDFDNSGTMSFGEFVALNKFLLKVQQAFSDQERGRGYLGHDEVYQAIVKLGFSLDTPAFYTACESFDRERDGQFQLDELISLCIFLQSARNLFNSFDTAKEGRVTLDLNQFIYCTAKA*

Click here to download the sequence:
Link to NCBI Protein BLAST