Transcript Information: R_Transcript_63161.p1


Annotated TAIR IDAT1G79440.1
Annotated Gene Namealdehyde dehydrogenase 5F1
Annotated Gene Symbol(s)ALDH5F1, SSADH1, SSADH
Annotation TypeOrtholog
Chromosome Positionchr1:29882525-29887275 | Reverse length=528
E-Value5.6E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8455186279219
Replicate 21.9160122052896
Replicate 32.7435826398433
Condition 2: 8 Hour
Replicate 11.6292875915467
Replicate 22.0830479281713
Replicate 32.8987362967918
Condition 3: 24 Hour
Replicate 12.5314692380358
Replicate 22.0126471991401
Replicate 32.7463659873293


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63161.p1 GENE.R_Transcript_63161~~R_Transcript_63161.p1 ORF type:3prime_partial len:526 (+),score=103.11,Aldedh|PF00171.18|4.9e-20,Aldedh|PF00171.18|6.8e-136 R_Transcript_63161:132-1706(+)
ATGTTTCGTCAAGCATATGGGACGGCTTTCCGGCGTTTCTGTACGTTTCGCCACGTTTCGCGTTCTGGAGACGTTTCAGGCACGCGAAATGCTATCTGGCCGGCGTTGCCGCGCACCATAGCGAGTGTTGGCCAACTTTCAAATTCAGATTATCATAGAGCTATGAGCACTGAAGCTCAAAATGTTGGTGCGAGGCTTAAAAGTTCAGGTTTATTACGAACCCAAGGCCTGATAGGAGGAAAATGGAGTGAAGCTTATGATGGGAATGTTATTGAGGTTACTAATCCTGCAACTGGTGATGTTGTAGCAAAAGTCCCATGCATGGGTGCAAGGGAAACAAACAATGCTATATCTGCGGCTTATGATGCATACATCTCATGGAGCAAAACCACAGCAGCAGAAAGGAGCAAATGCCTGCGAAAATGGTATGATCTGTTGATTGCTCACAAGGAAGAGCTTGGACAACTTATTACATTAGAACAGGGGAAACCCTTGAAAGAAGCACTTGGAGAGCCAGTAGGGGTGGTTGGAGTTATTACTCCTTGGAATTTCCCTTTGGCAATGATTACCAGGAAGGTTGGTCCTGCTCTTGCCAGTGGTTGCACTGTCGTGATAAAGCCATCTGAGCTTACCCCATTAACAGCTTTGGCTGCAGTCGAACTAGCTATTCAGGCTGGGATACCTCCGGGTGCTGTCAATGTAGTGATGGGGAATGCTGCCGAAATTGGGGATGCATTACTTGCCAGTACTCAGGTGAGGAAGATTACTTTCACAGGCTCAACTGCTGTGGGCAAGAAGTTAATGGCAGGTGCTGCTAAAACCGTTAAAAGGGTGTCTTTGGAACTTGGTGGCAATGCGCCTTGCATAGTATTTGATGATGCGGACTTGGATGTGGCAGTGAAAGGATCTCTCGCATCCAAGTTCCGCAATAGTGGTCAGACATGTGTATGTGCAAATAGGATCCTTGTTCAAGAAGGCATATATGATAGATTTGCGAAGGCTTTTTCAGATGCTGTTGAGAAGCTTCAAGTTGGAGATGGCTTTGCTGATGGTGTAGTACAGGGACCACTTATTACTGACGCTGCTGTTCAGAAGGTTGAAACATTTGTTCAGGATGCAATTCAAAAGGGAGCCAAAGTGCTTCTTGGTGGCAGGAGACATCGTCTTGGAATGACATTCTATGAGCCCACAGTCATGGCTAACGTAAAAAATGAGATGCTTATGTCAAGGGAAGAAATCTTTGGACCTGTGGCTCCCCTTCTCCCATTTAAAACAGAAGAAGAAGCCATCCACATTGCAAATGACACCAACGCAGGATTAGCCGCATATATATTCACAACAAACCTTCAACGTTCTTGGCGCGTCAGTGAGGCTCTTGAATATGGTATTGTTGGTGTTAATGAAGGAGTAGTTTCAACAGAGGTGGCTCCATTTGGAGGATTCAAGCAGTCCGGCCTTGGACGAGAAGGTTCCAAGTATGGCATGGATGAATATCTTGAAGTAACTCTTCCCAAATTCCAGCAGGTGGACAATCATATCAACTACCTAGGTTTTCTAGTTATGTTAATGTGGTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63161.p1 GENE.R_Transcript_63161~~R_Transcript_63161.p1 ORF type:3prime_partial len:526 (+),score=103.11,Aldedh|PF00171.18|4.9e-20,Aldedh|PF00171.18|6.8e-136 R_Transcript_63161:132-1706(+)
MFRQAYGTAFRRFCTFRHVSRSGDVSGTRNAIWPALPRTIASVGQLSNSDYHRAMSTEAQNVGARLKSSGLLRTQGLIGGKWSEAYDGNVIEVTNPATGDVVAKVPCMGARETNNAISAAYDAYISWSKTTAAERSKCLRKWYDLLIAHKEELGQLITLEQGKPLKEALGEPVGVVGVITPWNFPLAMITRKVGPALASGCTVVIKPSELTPLTALAAVELAIQAGIPPGAVNVVMGNAAEIGDALLASTQVRKITFTGSTAVGKKLMAGAAKTVKRVSLELGGNAPCIVFDDADLDVAVKGSLASKFRNSGQTCVCANRILVQEGIYDRFAKAFSDAVEKLQVGDGFADGVVQGPLITDAAVQKVETFVQDAIQKGAKVLLGGRRHRLGMTFYEPTVMANVKNEMLMSREEIFGPVAPLLPFKTEEEAIHIANDTNAGLAAYIFTTNLQRSWRVSEALEYGIVGVNEGVVSTEVAPFGGFKQSGLGREGSKYGMDEYLEVTLPKFQQVDNHINYLGFLVMLMWS

Click here to download the sequence:
Link to NCBI Protein BLAST