Transcript Information: R_Transcript_63356.p1


Annotated TAIR IDAT1G02910.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)LPA1
Annotation TypeOrtholog
Chromosome Positionchr1:655749-658125 | Reverse length=453
E-Value2E-221
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8856035744363
Replicate 25.9520762340845
Replicate 37.4140110523261
Condition 2: 8 Hour
Replicate 16.558713825155
Replicate 27.2872516714578
Replicate 36.5637520546935
Condition 3: 24 Hour
Replicate 17.3792951803335
Replicate 27.0399598690905
Replicate 36.5956252962749


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63356.p1 GENE.R_Transcript_63356~~R_Transcript_63356.p1 ORF type:complete len:448 (+),score=95.39,DUF3493|PF11998.4|9.5e-24,TPR_2|PF07719.13|4.9e-05,TPR_2|PF07719.13|0.15,TPR_11|PF13414.2|7.5e-10,TPR_1|PF00515.24|3.3e-05,TPR_1|PF00515.24|0.28,TPR_12|PF13424.2|1.9e-05,TPR_12|PF13424.2|3e+03 R_Transcript_63356:404-1747(+)
ATGAAGGTGGCTTCAATTACATGTCAACACCAACTACTCAGCTTCTCGAAAACTGAACACCATAACCACCCAATTCTTAATAGAAACAGCAAAAGAAAATGGGTTTTCAACAACACTTCAATCACTCCCAAACGCCTTCATTTCTCTCTCATCACGTGTTCTTCTTCTTCCTCTTCTCCGTCCCCAGAAACTGCTACCCAGACAGCTGAGTCTTGTGTTAACCTGGGTTTGTCTCTCTTCTCTAAAGGGCGGGTTAAAGATGCTTTAACACAATTTGATACAGCACTTACCTTAAATCCCAACCCTGTGGAAGCTCAAGCAGCACTCTACAATAAAGCATGTTGTCATGCTTACAGGGGGGAAGGAAAGAAAGCTGCTGATTGTTTGCGCACATCCCTTAAAGAATATAACCTCAAATTTGGGACCATCCTCAATGATCCAGATTTAGCCTCCTTCAGAGCTTTACCAGAATTCAAAGAATTGCAAGAAGAGGCGAGACTTGGTGGAGAGGATATAGGCTATAGTTTCAGGAGAGACCTCAAACTTATTAGTGAAGTCCAAGCTCCTTTTCGTGGCATTAGGAGATTCTTTTACGTGGCTTTTACCGCAGCGGCTGGAATTGCAACTTTCTTCACAATACCCAGGTTGTTACGTGCAATTCAAGGTGGTGATGATGCTCCTGATCTGTTAGCGACTGCTGGAAATGCTGCCGTAAACATTGCAGGTGTTATCATTCTGGTGGCACTATTTTTATGGGAAAACAAGAAAGAAGAGGAACAGCTTGCACAAATATCTCGAAATGAAACTTTGTCGAGGTTACCACTACGACTTTCTACCAATCGGATAGTTGAACTTGTGCAGCTGCGAGACACTGTCAGACCGGTTATTCTGGCTGGCAAAAGGGAGAGTGTTTCTATGGCAATGCAAAAGGCTGAAAGGTTTAGAACTGAGCTTGTTAGAAGAGGTGTTTTGTTGATTTCTGTGATATGGGGCGAGGTTAAGGCAGCTCCCATGGAGAAGAAAGGTTTTGGGGGTTCTCAAAAGGCAGCTGCTGCTCAACCTTCTATTGGAGATGAATTCGACAAACGGGCTCAGTCTATTACTGCCAAATCAAGGCTGCAAGCTGAGATACGATTCAAGGCTGAGGCGGTGTCCCCAGAAGAATGGGAAAGGTGGATAAAGGACCAACAACAATCTGAAGGAGTTACTCCTGGTGAGGATGTCTACATCATTCTACGTCTAGATGGCCGGATTCGCAGATCAGGAAAAGGCATGCCTGACTGGCCACAAATAGTGAACGAGCTACCTGCTATGGAGAACTTGCTGAGCCAGCTTGAAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63356.p1 GENE.R_Transcript_63356~~R_Transcript_63356.p1 ORF type:complete len:448 (+),score=95.39,DUF3493|PF11998.4|9.5e-24,TPR_2|PF07719.13|4.9e-05,TPR_2|PF07719.13|0.15,TPR_11|PF13414.2|7.5e-10,TPR_1|PF00515.24|3.3e-05,TPR_1|PF00515.24|0.28,TPR_12|PF13424.2|1.9e-05,TPR_12|PF13424.2|3e+03 R_Transcript_63356:404-1747(+)
MKVASITCQHQLLSFSKTEHHNHPILNRNSKRKWVFNNTSITPKRLHFSLITCSSSSSSPSPETATQTAESCVNLGLSLFSKGRVKDALTQFDTALTLNPNPVEAQAALYNKACCHAYRGEGKKAADCLRTSLKEYNLKFGTILNDPDLASFRALPEFKELQEEARLGGEDIGYSFRRDLKLISEVQAPFRGIRRFFYVAFTAAAGIATFFTIPRLLRAIQGGDDAPDLLATAGNAAVNIAGVIILVALFLWENKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVILAGKRESVSMAMQKAERFRTELVRRGVLLISVIWGEVKAAPMEKKGFGGSQKAAAAQPSIGDEFDKRAQSITAKSRLQAEIRFKAEAVSPEEWERWIKDQQQSEGVTPGEDVYIILRLDGRIRRSGKGMPDWPQIVNELPAMENLLSQLEK*

Click here to download the sequence:
Link to NCBI Protein BLAST