Transcript Information: R_Transcript_63390.p1


Annotated TAIR IDAT4G20380.8
Annotated Gene NameLSD1 zinc finger family protein
Annotated Gene Symbol(s)LSD1
Annotation TypeHomolog
Chromosome Positionchr4:11005027-11006438 | Forward length=210
E-Value8E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7616419881875
Replicate 22.5560713550276
Replicate 35.1789145869562
Condition 2: 8 Hour
Replicate 12.5550467771039
Replicate 21.5555396063433
Replicate 32.6832815699703
Condition 3: 24 Hour
Replicate 13.7930290202294
Replicate 22.1096334590987
Replicate 33.6162294700091


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63390.p1 GENE.R_Transcript_63390~~R_Transcript_63390.p1 ORF type:complete len:115 (+),score=6.37,zf-LSD1|PF06943.8|1.2e-11,zf-LSD1|PF06943.8|1.6e-11,zf-LSD1|PF06943.8|1.3e+03 R_Transcript_63390:245-589(+)
ATGGATCAGATCATATGCGGGGGTTGTCGAACTTTACTAATGTACACTCGTGGGGCGAGGAGTGTGAGGTGTCTATGTTGTCAAATGGTGAACTTGACAATAAATCAGGTTGCCACGATCCATTGTGGATGCTGCCACATGGCACTTATGTATCCTGCTGGAGCTCCATCGGTCAAATGTGCCATCTGTCACTTCATTACAAATGTTGGAACTGCCAATCATATGCCATATGGTGCTAGTAACTTTTCCGCGGATCCAACTTCATCACCAATGCCTCGTTGTGAAACTGAAACAGTGGTCATAGAAAACCCTACATCATTCGATCAAAGTGGGAAACCGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63390.p1 GENE.R_Transcript_63390~~R_Transcript_63390.p1 ORF type:complete len:115 (+),score=6.37,zf-LSD1|PF06943.8|1.2e-11,zf-LSD1|PF06943.8|1.6e-11,zf-LSD1|PF06943.8|1.3e+03 R_Transcript_63390:245-589(+)
MDQIICGGCRTLLMYTRGARSVRCLCCQMVNLTINQVATIHCGCCHMALMYPAGAPSVKCAICHFITNVGTANHMPYGASNFSADPTSSPMPRCETETVVIENPTSFDQSGKPV*

Click here to download the sequence:
Link to NCBI Protein BLAST