Transcript Information: R_Transcript_63405.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value8E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2870677596276
Replicate 22.1534667093639
Replicate 31.3215425536242
Condition 2: 8 Hour
Replicate 13.76705614573
Replicate 23.0101187093904
Replicate 32.2107730883805
Condition 3: 24 Hour
Replicate 12.7961431879896
Replicate 22.1206979702478
Replicate 32.8061159854997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63405.p1 GENE.R_Transcript_63405~~R_Transcript_63405.p1 ORF type:5prime_partial len:156 (+),score=18.78,zf-RVT|PF13966.2|5.3e-10,zf-RVT|PF13966.2|1.2e+03 R_Transcript_63405:2-469(+)
TTTTTGTGGACAGTTGCCTTGGACCGAATTAATACTCATGATGTTCTGCAGCGACGCTACCCACGTTGGTGTCTGTCCCCTGGTGTTTGTGTTATGTGTCGTAGAGAGAATGAGACCAATTCTCATCTTTTTTTGACCTGTGACGTGGCGCAAGGCTTATGGCGTAGGCTTTTTGGGGTGAAGGGAGAGATTTGGGTTTGCCCACCAACTGTTTCTCATCATTTGTTGGGTCATTATGTGGGTTTTGGGAGAGGAAAGGATCAGAGTTTGTTGTGGCGTGGTGCGATGGTGGCAATGTTATGGAGCATTTGGCTAGAAAGGAATGCAAGGATCTTCCATGGGGTGATAACCCCCCCTGCTTTTGTTTGGGAGAGGGTGTTGTTTAGGGCCTCTTTATGGGCCCGGGCTTTTGGTGCTTTCCGTGATGTACCCTTGTCTGCGGTTGTGCGGCATTGGGATATTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63405.p1 GENE.R_Transcript_63405~~R_Transcript_63405.p1 ORF type:5prime_partial len:156 (+),score=18.78,zf-RVT|PF13966.2|5.3e-10,zf-RVT|PF13966.2|1.2e+03 R_Transcript_63405:2-469(+)
FLWTVALDRINTHDVLQRRYPRWCLSPGVCVMCRRENETNSHLFLTCDVAQGLWRRLFGVKGEIWVCPPTVSHHLLGHYVGFGRGKDQSLLWRGAMVAMLWSIWLERNARIFHGVITPPAFVWERVLFRASLWARAFGAFRDVPLSAVVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST