Transcript Information: R_Transcript_63408.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4291805791924
Replicate 27.3104527765248
Replicate 36.9554871243378
Condition 2: 8 Hour
Replicate 15.3531850491953
Replicate 27.4234506517296
Replicate 36.02604077276
Condition 3: 24 Hour
Replicate 16.3203679817161
Replicate 25.1789676747105
Replicate 37.0005209322465


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63408.p1 GENE.R_Transcript_63408~~R_Transcript_63408.p1 ORF type:5prime_partial len:247 (+),score=24.61,zf-RVT|PF13966.2|8.1e-18,zf-RVT|PF13966.2|4.6e+03 R_Transcript_63408:2-742(+)
TCCTCCTTTTTCCTTGCAGACCAGGATAGCTGGGACTTTTATCTTCGTAGGAACCCTCTCGATTGGGAAGTTGATGAGCTGGTTTCCCTTGTGACTCTTCTGGAGTCTATCCATCCTGGGGGCGGGGTGGATTCTAGGACCTGGTTGGGGGATTCCACTGGCACGTTCTCGTGCAAGTCCTTTCTTCGCCAGCTTGACCCTCTTCCTAATCCCTCCCCTTTCCCTATGGCCCCTGTTATTTGGAAGGCCAAAGTGCCCTCTAAGGTGCGTGCTTTTTTGTGGACAGTGGCGTTGGATAGAGTTAATACTCATGATGTTCTGCAGAGACGTTTCCCGCGGTGGTGCCTCTCTCCTGGAGTTTGTGTTATGTGTCGAAGAGAGAACGAGACCATTCCTCATCTCTTCCTGACCTGCGATGTGGCGCAAGGGCTATGGTATAGGCTTTTTGGGGTGAGGGGAGAAAGTTGGGTGTGTCCATCAAATATTTCTCATCTTTTGTTGGGACATCAGGTGGGCTTTGGGAGAGGAAAGGATCAAAGCGTGTTGTGGAGGGGCGCGATGATGGCTGTGCTCTGGAGCATTTGGTTAGAGAGGAACACAAGGATTTTCAATGGGGTGATAACCCCCCCTGCTCTTGTCTGGGATAGGGTGTTGTATAAGGCCTCTTTATGGGCCCGGGCGTTTGGAGCTTTTAGTGATATCCCCCTATCCGCGGTTGTGCGGCACTGGGATATTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63408.p1 GENE.R_Transcript_63408~~R_Transcript_63408.p1 ORF type:5prime_partial len:247 (+),score=24.61,zf-RVT|PF13966.2|8.1e-18,zf-RVT|PF13966.2|4.6e+03 R_Transcript_63408:2-742(+)
SSFFLADQDSWDFYLRRNPLDWEVDELVSLVTLLESIHPGGGVDSRTWLGDSTGTFSCKSFLRQLDPLPNPSPFPMAPVIWKAKVPSKVRAFLWTVALDRVNTHDVLQRRFPRWCLSPGVCVMCRRENETIPHLFLTCDVAQGLWYRLFGVRGESWVCPSNISHLLLGHQVGFGRGKDQSVLWRGAMMAVLWSIWLERNTRIFNGVITPPALVWDRVLYKASLWARAFGAFSDIPLSAVVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST