Transcript Information: R_Transcript_63505.p1


Annotated TAIR IDAT4G13980.1
Annotated Gene Namewinged-helix DNA-binding transcription factor family protein
Annotated Gene Symbol(s)AT-HSFA5, HSFA5
Annotation TypeOrtholog
Chromosome Positionchr4:8077519-8079247 | Reverse length=466
E-Value2.6E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8840144300256
Replicate 26.390178387569
Replicate 38.1486418326234
Condition 2: 8 Hour
Replicate 16.4843990176499
Replicate 29.6779310735566
Replicate 310.54658798892
Condition 3: 24 Hour
Replicate 18.0306954136435
Replicate 26.0586580746843
Replicate 38.3917286744231


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63505.p1 GENE.R_Transcript_63505~~R_Transcript_63505.p1 ORF type:5prime_partial len:506 (+),score=86.29,HSF_DNA-bind|PF00447.13|2.6e-35 R_Transcript_63505:3-1520(+)
CAAGCTTTAGCTTTAAAACTCAAAAAGACGAAATTTCTTCATCTTCTTTCTCATTCTCAACCTCAAATTCAATTCAATTCAATTCCGGCGGCGATGGAGCTGACAGCGGCGACAAACAGCTCATCCTCCGGTGGTCCGGCGCCGTTCCTGTTGAAGACGTACGACATGGTGGATGACTCAAGTACAGACGAGATCGTATCATGGAGCCCAACTCATACCAGCTTCATTGTTTGGAACCCTCCTGAATTTCAACGCCTTTTGCTTCCTACCTACTTCAAACACAACAACTTTTCCAGCTTCATTCGCCAGCTCAACACCTATGGATTTCACAAAATTGACCCGGAAAGATGGGAATTTGCGAATGAGGATTTTGTGAAAGATAAAAAGCATCTCCTGACGAATATCCACCGAAGGAAGCCCATCCACAGCCACAGTCATCCTCCAGTGGATACAGAGAGAGCCGCATTTGAGGAAGAGATAGATAAGCTTATGCGTGAGAAAAATGAGCTGGATACCAAGGTGTCAGGGTTCAGGCAGCAGCAGTCTGCTGCAAAGTCGCAGCTTGAAGACATAACACAGCGTATAGGAGGTATGGAGCAAAGGCAGGAGAACTTGCTAACCTTCTTGCATAAAGCAGTCCAGGAACCCACATTTGTTGAACATCTTGCTCAGAAAATAGATGCTATGGATCTCTCGGCATATAACAAGAAAAGGCGATTGCCCCGAGTTGATCAGTTTCAGCCAGCTGCAGAGAATACTTTAGGAGACAATCAAAGCAGTTACCAGCAAGATTTGGCTAATAAACTCAAACTGGAGTTGTCAACGGCTGTTTCAAACATGAACTTGGTCTCGAATAGCACTTACAGCTCAAATGAAGACTGGGCAAGTCCACCAAGGAGTTCGGCTGATCCAGACCTGAGAGGTACAGATATGGAAATGAGTACTCTTCCATTCGCAACAGAAACCATAGAAATGTCTGACACTCAGACGTGTCTGGCATTTAAGATGAATTCGTCACTGTCGGACAAAGTCGGAGCAAAAGAGTGTCCAGGATTGCAGTCTTTGCAGCCAAGTTTGGTTCCAACAGAAGATTCTATATGCTGCCAATTAAATCTTTCATTAGCGTCTTCTCCATTGCAAGCCAACCAAAACCCTCATTCGAGTAAAGGAACCAGTGTGGACTTGGAAGCTATTGGATCTCTTGGGACAAGGCCTGATAAAAGAGGTAGTAGGGATGAAATCAGGACTGCTTCAAAGAATAATCTTCTCAATAGTAATACGGGTACTTTATCTTCATCACAAGAGACCCCAAGTAATAAACAGGGTCCTACTCCTGCTGCACCACCCAGAGTAAATGACCTTTTCTGGGAACAGTTTTTAACCGAAAGACCAGGGTCCTCAGACACAGAGGAGGCCTGTTCATCCTATAGGGCTCTTCCTCATGATGAGCAAGAAGAAAGAGCTTCCAACCATGGAATGTCTAGAACTGCAAAGAATTTGGGCAATCTTACACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63505.p1 GENE.R_Transcript_63505~~R_Transcript_63505.p1 ORF type:5prime_partial len:506 (+),score=86.29,HSF_DNA-bind|PF00447.13|2.6e-35 R_Transcript_63505:3-1520(+)
QALALKLKKTKFLHLLSHSQPQIQFNSIPAAMELTAATNSSSSGGPAPFLLKTYDMVDDSSTDEIVSWSPTHTSFIVWNPPEFQRLLLPTYFKHNNFSSFIRQLNTYGFHKIDPERWEFANEDFVKDKKHLLTNIHRRKPIHSHSHPPVDTERAAFEEEIDKLMREKNELDTKVSGFRQQQSAAKSQLEDITQRIGGMEQRQENLLTFLHKAVQEPTFVEHLAQKIDAMDLSAYNKKRRLPRVDQFQPAAENTLGDNQSSYQQDLANKLKLELSTAVSNMNLVSNSTYSSNEDWASPPRSSADPDLRGTDMEMSTLPFATETIEMSDTQTCLAFKMNSSLSDKVGAKECPGLQSLQPSLVPTEDSICCQLNLSLASSPLQANQNPHSSKGTSVDLEAIGSLGTRPDKRGSRDEIRTASKNNLLNSNTGTLSSSQETPSNKQGPTPAAPPRVNDLFWEQFLTERPGSSDTEEACSSYRALPHDEQEERASNHGMSRTAKNLGNLTL*

Click here to download the sequence:
Link to NCBI Protein BLAST