Transcript Information: R_Transcript_63563.p1


Annotated TAIR IDAT2G13600.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5671493-5673586 | Forward length=697
E-Value2E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4870043333307
Replicate 21.6341460229666
Replicate 32.5121775901441
Condition 2: 8 Hour
Replicate 12.5409859850915
Replicate 22.6896343724068
Replicate 33.7459102105751
Condition 3: 24 Hour
Replicate 13.5465480505062
Replicate 22.41879608116
Replicate 33.484481288598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63563.p1 GENE.R_Transcript_63563~~R_Transcript_63563.p1 ORF type:complete len:848 (+),score=140.01,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|4e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|2,PPR|PF01535.16|0.46,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.015,PPR|PF01535.16|3.4e-05,PPR|PF01535.16|4.4,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|0.0024,PPR|PF01535.16|2.7,PPR|PF01535.16|2,PPR_2|PF13041.2|39,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|0.99,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.88,PPR_2|PF13041.2|2.8e-09,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|0.00053,PPR_2|PF13041.2|7.6e-10,PPR_2|PF13041.2|16,PPR_2|PF13041.2|1e-07,PPR_2|PF13041.2|0.0069,PPR_2|PF13041.2|71,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|81,PPR_1|PF12854.3|69,PPR_1|PF12854.3|80,PPR_1|PF12854.3|6,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|75,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|10,PPR_1|PF12854.3|1.6,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.00069,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.0063,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|8.4e+02 R_Transcript_63563:723-3266(+)
ATGGTAGTCAAGCTCTTGTGGCAGCGATGGAGCTTTCTCTCAGTTCCCTCTCGTCGGCATTTTTGTTTCCTCACCCACCAAGAAGACCTTTTCTCAAAACATGCCTTTTATCGCGATCTATCATCTCAACAATCTATTTATACGGACAAATCCCAGAAATTCTATGAGGCTATGAAAGATTGTGTAACTCTAGCTTCTGTGCCCATTGCCTGCAAACTCCATGGTCAGCTTATATCAACTGGCTTAGGCTCTTCAGTATACCTTCAAAACCATCTCTTACACATGTACTTTAGTTGCCACTTGGTAGGGAATGCTTGTCGTGTGTTCTCTGAAATCGAGTTCCCTAATGTTTTTAGCTGGAACACAATGATCAATGGGTTGGCAAACTGTGGACAGATTTGTGAAGCAGCTAAGCTGTTTGAGAAAATGCCCCAGAGAGATGTAGTATCATGGAATACAATGATGTCCAGCTATTTTAACAATGGGAGGCCTGGAGATAGTATAAGGGTTTTTATTTCTCTGTTGCAAGAGTGCTTCGTATCTCTTGTCCCTTCTTCTTTCTCAAGTGCGATGAAGGCTTGTGCTAGTATTTGTTGCCTTAGATTGGCAATTCAGTTGCATGGTTCAGCAGAGAGGCATGGGTTTTCTGATGATACTTCAGTTAAAGCTTCAATCATTGATATGTACATCAAGTGCAATGCTGTCAGTTATGCGGAACAAGTCTTTCGTCGGATGAAGAATCCTAATTTGTTTTGCTGTAATAGTATGATCTATGGTTACTCGATACTATATGGTGTTGAAGCTGCTGTGAATTTGTTTTATCAGATGCCTGAACATGATGATGTTTCATGGAGTACTATGATATCCTTATCTTCCCAACATGGTTATGGATCTAAAGCCCTTAATATGTTTGTTGAGATGTGGAACCAAGGGTTCATGCCAAATTCCATGACATATGCTACTGTGATCAGAGCATGCACAGGCCTGTATGGTCTGTATTGGGGTTGCCATTTGCATGCCAGAATTCTCAGAATGGAATCAAGCCTTGATGCTTACACTGGGAATGCTTTGATTGACATGTACGCCAAAGGTGGGTTCTTGGACTCTGCAAGACGAGTATTTGATTGCTTAACAGAACACAATGTAGTCTCGTGGACCTCCTTAATTGCAGGTAATGTGCAGTTTGGCCGCATAGAGCAAGCTTTAGCACTGTTCAATCAAATGAGGAAGGTTCCTCTGTTTCCTGATGCAATCACTGTCTCTACTGTACTCAGTGTATGTACATCTTATAAGGATATCACTTTGGGAATGCAGCTCCATGGATACACTGTCAAAACTGGCGCTGATTCTTTAACAACTGTGGGAAATGCCTTGATTACAATGTATGGCAAGGTTGGTAATGTTTGTTGTGCCGAAACCCAATTCGATTTGATGCCCATCAAAGATATAATATCCTGGACAGCAGTGATCACAGCATTTTCCCAGAACAGTGATGTTGAAAAGGCGCGGGAATACTTTGATAAAATGCCTCAGCGAAATGTTGTCACTTGGAACTCCATGATGGCAGCGTATGTACAAAATGGTTTTCGGGAAGAAGGTCTCAAGTTGCATCGCCTGATGTTAACACATGGGATTGAGCCAGATTCAATTACTTTTGTGACTTCCATCAGTGCCTGTGCTGATTCTGCATTATTAGAAATGGGCAGCCAAATTGTGGCTCAAGCTGTAAAGTCTGGTTTTGCTTCATATGTTTCGGTTGCAAACAGTGCTGTTACAATGTATTCCAAATGTGGATTGGTTACTGAGGCAGAGAAAGTTTTCAATTCTATAACCACAAAAAATGTGATATCTTGGAATTCAATGATGGCTGGTTATGCTCAAAATGGTTTCGGCATGAAAGCGATTGAGATGTTTAAGACTATGTTGATGTTTAATTCTGCACCTGATGACATCAGCTATATCTCACTCCTAATGGGTTGCAGCCATGCTGGACTTGTAGAGGAAGGATGCCGTTACTTCAACTCCATGAAAAATGATCATGGTATCTGCCCAACACGTGGACATTATGCTTGCATGGTCGACCTGCTTGGCCGTGCAGGGTTTATAGAGCAAGCCCTGGTTGTTATAGCTGAAATGCCTTTCAAAGCAACTGATGATGTTTGGGGAGCACTCCTTGCTGCTTGCCGTACTAATAAAAGCACTAAATTTGTAGAATTTGCTGCAAGACAGTTGCTGGAACTTGATGTTAAAGGATCAGGAAGTTATTCCCTCCTGGCTAATCTGTATTCTGAGTCTGGGAAATTAGGACATGTAACTGGTGTCAGAAAACTGATGAGAGATAAAGGAATCCAGAAAGTTACTGGCTGTAGCTGGATTGAAATTCATAACAGGGTGCACGTGTTTACTGCAGATGGCAGCAACAACCCTCAAATAATTGATGTTATTAAAGTGCTGGAAAGGCTATGCAAAATGGAAGACATGAACAGCGATGAGAAAGAGCAAAATTTGCTGGATCCTGGTGGTTGTGAAATGCTTGTGGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63563.p1 GENE.R_Transcript_63563~~R_Transcript_63563.p1 ORF type:complete len:848 (+),score=140.01,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|4e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|2,PPR|PF01535.16|0.46,PPR|PF01535.16|0.00022,PPR|PF01535.16|0.015,PPR|PF01535.16|3.4e-05,PPR|PF01535.16|4.4,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|0.11,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|0.0024,PPR|PF01535.16|2.7,PPR|PF01535.16|2,PPR_2|PF13041.2|39,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|0.99,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.88,PPR_2|PF13041.2|2.8e-09,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|0.00053,PPR_2|PF13041.2|7.6e-10,PPR_2|PF13041.2|16,PPR_2|PF13041.2|1e-07,PPR_2|PF13041.2|0.0069,PPR_2|PF13041.2|71,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|81,PPR_1|PF12854.3|69,PPR_1|PF12854.3|80,PPR_1|PF12854.3|6,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|75,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|10,PPR_1|PF12854.3|1.6,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.00069,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.0063,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|8.4e+02 R_Transcript_63563:723-3266(+)
MVVKLLWQRWSFLSVPSRRHFCFLTHQEDLFSKHAFYRDLSSQQSIYTDKSQKFYEAMKDCVTLASVPIACKLHGQLISTGLGSSVYLQNHLLHMYFSCHLVGNACRVFSEIEFPNVFSWNTMINGLANCGQICEAAKLFEKMPQRDVVSWNTMMSSYFNNGRPGDSIRVFISLLQECFVSLVPSSFSSAMKACASICCLRLAIQLHGSAERHGFSDDTSVKASIIDMYIKCNAVSYAEQVFRRMKNPNLFCCNSMIYGYSILYGVEAAVNLFYQMPEHDDVSWSTMISLSSQHGYGSKALNMFVEMWNQGFMPNSMTYATVIRACTGLYGLYWGCHLHARILRMESSLDAYTGNALIDMYAKGGFLDSARRVFDCLTEHNVVSWTSLIAGNVQFGRIEQALALFNQMRKVPLFPDAITVSTVLSVCTSYKDITLGMQLHGYTVKTGADSLTTVGNALITMYGKVGNVCCAETQFDLMPIKDIISWTAVITAFSQNSDVEKAREYFDKMPQRNVVTWNSMMAAYVQNGFREEGLKLHRLMLTHGIEPDSITFVTSISACADSALLEMGSQIVAQAVKSGFASYVSVANSAVTMYSKCGLVTEAEKVFNSITTKNVISWNSMMAGYAQNGFGMKAIEMFKTMLMFNSAPDDISYISLLMGCSHAGLVEEGCRYFNSMKNDHGICPTRGHYACMVDLLGRAGFIEQALVVIAEMPFKATDDVWGALLAACRTNKSTKFVEFAARQLLELDVKGSGSYSLLANLYSESGKLGHVTGVRKLMRDKGIQKVTGCSWIEIHNRVHVFTADGSNNPQIIDVIKVLERLCKMEDMNSDEKEQNLLDPGGCEMLVV*

Click here to download the sequence:
Link to NCBI Protein BLAST