Transcript Information: R_Transcript_63565.p2


Annotated TAIR IDAT2G13600.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5671493-5673586 | Forward length=697
E-Value1E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0165957880348
Replicate 20.94101066291532
Replicate 32.1174295256948
Condition 2: 8 Hour
Replicate 11.9204599958624
Replicate 22.7559630280453
Replicate 32.5930872314839
Condition 3: 24 Hour
Replicate 12.5723033308352
Replicate 22.4711774667313
Replicate 32.4524038864871


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63565.p2 GENE.R_Transcript_63565~~R_Transcript_63565.p2 ORF type:complete len:357 (+),score=64.17,PPR|PF01535.16|1.5,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|4.9e-08,PPR|PF01535.16|0.039,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.66,PPR|PF01535.16|0.59,PPR_2|PF13041.2|59,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|1e-11,PPR_2|PF13041.2|5.7,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.0032,PPR_2|PF13041.2|24,PPR_2|PF13041.2|3.1e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|91,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.3,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|69,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|0.78,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.72 R_Transcript_63565:1997-3067(+)
ATGCAGCTCCATGGATACACTGTCAAAACTGGCGCTGATTCTTTAACAACTGTGGGAAATGCCTTGATTACAATGTATGGCAAGGTTGGTAATGTTTGTTGTGCCGAAACCCAATTCGATTTGATGCCCATCAAAGATATAATATCCTGGACAGCAGTGATCACAGCATTTTCCCAGAACAGTGATGTTGAAAAGGCGCGGGAATACTTTGATAAAATGCCTCAGCGAAATGTTGTCACTTGGAACTCCATGATGGCAGCGTATGTACAAAATGGTTTTCTGGAAGAAGGTCTGAAGTTGCATCACCTGATGTTTAGACATGGGATTGAGCCAGATTCAATTACTTTTGTGACTTCCATCAGTGCGTGTGCTGATTCTGCATTATTAGATCTGGGCAGCCAAATTGTGGTTCAAGCTGTAAAGTCTGGTTTTGCTTCATATGTTTCGGTTGCAAACAGTGCTGTTACAATGTATTCCAAATGTGGATTGGTTACTGAGGCAGAGAAAGTTTTCAATTCTATAACCACAAAAAATGTGATATCTTGGAATTCAATGATGGCTGGATATGCTCAAAATGGTTTGGGCATGAAAGCGATCAAGATGTTTAAGTCTATGTTTATGTTTAATTTTGCACCTGATGACATCAGTTATGTCTCACTCCTAATGGGTTGCAGCCATGCTGGACTTGTAGAGGAAGGATGCCGTTACTTCAACTCCATGAAAAATGATCATGGTATCTGCCCAACTCGTGGACATTATGCTTGCATGGTAGACCTGCTTGGCCGAGCAGGGTTTCTAGAGCAAGCCCTGGTTGTTATAGCTGAAATGCCTTTCAAAGCAACTGATGATGTTTGGGGAGCACTCCTTGCTGCTTGCCGTACTAATAAAAGCCCTAAATTTGTAGAATTTGTTGCAAGACAGTTGCTGGAACTGGATATAAAAGGATCAGGAAGTTATTCCCTCCTGGCTAATCTATATTCTGAGTCTGGGAAATTAAAACTTGTAACTGGTGTCAGAGAACTGATGAGAGATAAAGGAATCCGGAAAGTTACTGGCTGCAGCTGGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63565.p2 GENE.R_Transcript_63565~~R_Transcript_63565.p2 ORF type:complete len:357 (+),score=64.17,PPR|PF01535.16|1.5,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|4.9e-08,PPR|PF01535.16|0.039,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.66,PPR|PF01535.16|0.59,PPR_2|PF13041.2|59,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|1e-11,PPR_2|PF13041.2|5.7,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.0032,PPR_2|PF13041.2|24,PPR_2|PF13041.2|3.1e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|91,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.3,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|69,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|0.78,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.72 R_Transcript_63565:1997-3067(+)
MQLHGYTVKTGADSLTTVGNALITMYGKVGNVCCAETQFDLMPIKDIISWTAVITAFSQNSDVEKAREYFDKMPQRNVVTWNSMMAAYVQNGFLEEGLKLHHLMFRHGIEPDSITFVTSISACADSALLDLGSQIVVQAVKSGFASYVSVANSAVTMYSKCGLVTEAEKVFNSITTKNVISWNSMMAGYAQNGLGMKAIKMFKSMFMFNFAPDDISYVSLLMGCSHAGLVEEGCRYFNSMKNDHGICPTRGHYACMVDLLGRAGFLEQALVVIAEMPFKATDDVWGALLAACRTNKSPKFVEFVARQLLELDIKGSGSYSLLANLYSESGKLKLVTGVRELMRDKGIRKVTGCSWI*

Click here to download the sequence:
Link to NCBI Protein BLAST