Transcript Information: R_Transcript_63843.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6358781834719
Replicate 21.3906344466821
Replicate 31.8404979176062
Condition 2: 8 Hour
Replicate 11.9939629435867
Replicate 23.1805380251849
Replicate 33.5278374604227
Condition 3: 24 Hour
Replicate 13.6144213333519
Replicate 21.7481366981674
Replicate 33.7548939636588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_63843.p1 GENE.R_Transcript_63843~~R_Transcript_63843.p1 ORF type:complete len:921 (+),score=95.42,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|3.4e-21,zf-RVT|PF13966.2|6.4e+03,zf-RVT|PF13966.2|5e-16 R_Transcript_63843:2130-4892(+)
ATGCTTTTCCCCCTCTCGGAGGTGCATCATGAGGATGATGGTTTCTCTGACCACCTCCCCATTATGCTCTATCTAAATAGTGAAGGGAGACCACCAAGGCGGAAGGGGCGGCATAGGTTCAAGTTCGAAAATATGTGGGTTGGTGCGGAGGGATGCGAGGAGGTTATTCAGGAGGCTTGGAGGCAGGGGCACAACTGGGTCGAAGCAATGCGGAGGTGTAAAGAAGCTCTCAAGGAATGGAACGAAAACTCATTTGGCAACGTGCAAAAACAAATAAAGGAAACTCAACGTCATCTAGCAAGTGCAGTAGGGGCTATGGAACGCAAGCAATGGCAAGTGAAGTTGCGCGAGCTCCGACGTCGCGAGGAGATATTGTGGAGTCAAAGATCTCGTGTCGATTTTTTGAAGCATGGAGATAATAACACTAAGTGGTTTCATGCAAAGGCAAGTGCAAGACGTAAGAGAAACTACATCTCCAGATTAATTGATAGTTCGGGTAATATGGTGGAGAATGTCGAGGACCTTCCAAGAGTGGTGGTGGAGTATTTTGAGTCCATATTCAAGACGGAGAATCCAACCAACCTTGATCATGTGTTGAATTATGTCCAGCCGACGGTGACGACGGAAATGAATGAGGTCCTATGCAAACCGTACACGTCGGAGGAGATTTTTGAAGCACTAAGGCAAATGCACCCTAACAAAGCACCGGGTCCCGACGATGATACTATTATTTTTGCTAAAGCGGATGCGACACATGCAGGAATGATAATGGATATCCTCGGGGATTACGAGCGAGCTTCTGGTCAGCAAGTAAACTTGACAAAAACCACAACCTCATTCAGCAAGGGTGTCCCCTCCCACACTCGGCAACAGTTATGTCAAATTATGGGGGTCGTGGAGGTACCCACCCAGGATAAGTATCTGGGCCTACCCACTTTTATTGGCCGAAGTAAGAAGAAAGCATTCACCCCAATCAAGGATCGAATTCGCATGAAATTACAAGGATGGATGGATAGATACCTTTCGTGGTCAGGTAAGGAGGTTCTTATTAAGGCGGTAGCCCAAGTTATTCCTACTTATGCCATGAGTGTCTTCAAATTCCCAAGTGATTTTTGCAATGAGATCAATAGTCTTGTGAGGAAATTTTGGTGGGGGCACAAAGATGGTAAGCGGAAAATCCATTGGGTGAAGTGGGAAAGACTGTGTCGCTCCAAAGACGATGGTGGGCTGGGGTTTCGGGATATCAGTGCATTTAATGACGCTTTACTGGCAAAGCAGCTGTGGCGCCTATTATGTGACCCGACTTCATTATGTGCCAAAGTACTGAAGGCGAGATACTATGCGTCAACTGACATTCTAGGGGCGGAGCTTGGGACCCGTCCGAGCTACATCTGGAGAAGCTTATGGGGAGCCCGAGCCACTCTTTTAAAGGGACTACAATGGACCGTGGGGGATGGTGAATCAATACGAGTATGGAAAGACCCATGGGTACCTAGGCCAACAACATTTCGCCCTATTACACCTATGGGGTCGCATGATCCGGATCTACGGGTAAGCTTCCTGATTAATAAGGAACACGGCAAGTGGGATGAAGTCAAGCTCAATAATATTTTCCTCCCTATGGATGCTGATTTGATCAAGCAAATATCCCTTTGTGCTCAATGGCCACCTGACCGCTTGGTATGGCACTTCACCCCTACAGGCATATTCACGGTGCGGTCAGCGTATCATGCCTCTATGAATGAGAGGCGAAGAGACGAGCCAGTGTCTAGTGCCTCCAGTGCAAGAAGTATGTGGAAGGAAATATGGTCTCTTGATGTACCCCCTCGAATCCGTATGTTTGGGTGGAAGGCACTTTCCAATGCTTTACCAACGAAGTGGGGGCTGGGACGGAGGATGGAGAATGTCGACCTGGGGTGTGCTGTGTGTGGAGCTTCGGAGGACACAAGCCTACACGCCCTTCTCTGGTGTCCCCTTGCACGTAAGGCTTGGGGGGAGATGTCAAGGCCACAATGGATGCTGGATGGCAGGTACCACTCGGTGTGGGACTGGTGGGAGGAGGTCCGAACCAATCCATCAATGGAGGATTTTGGGATCTTTGTCGCCGCTGTTTGGGCCGTCTGGAATGAGAGATGTCGCCTCTTGTATGATGAAGGGTATAAGGCTGGGGGGGAGATTATCCAAAATGCGAGTACTTTTGTTTCTCGCTACAGGGACGCGAGGGAGAGCCATGGAGAGGCGCTGCAAAAACAGAGACAGGAGCAGGGGTGGACGCCGCCGAGTGCTGGCATGTGGAAGCTTAATACGGACGCTGGGAAGATTGGAGATTGGGGAGTTGGTTGGGGGTGTGTAGTGCGTGATAGTGAGGGGGAGGTTGTTGCATTGGGGGTTCATCAATTTAGAGGTATTATGCATGCAGAGATTGAGGAAGCTAATGCACTTTTATTTGGGATGCAAGCTGCATGGGAAACTGGTTATCGCAAACTGGTAGTAGAGAGTGATTGCTTGGGGTTAATCCAGAAACTCAAGAATCGCACTCCTATACGGTCCATACTGGGTTATATCATAGATGAGATTTTATCTTATGCTTTGAAGTTTGATTTTATTTCATGGAATTATGTTTGTAGGCAGGGCAATAGTGTAGCCCATAATGTAGCTAGACTCCGACCTTATGTGGAGGAGGATCGCTTTTGGTTTGAGGACATGCCCGACAATATCATTAATTTGGCGCGCATGGACTTTTGTACCTGTTTAGTAAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_63843.p1 GENE.R_Transcript_63843~~R_Transcript_63843.p1 ORF type:complete len:921 (+),score=95.42,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|3.4e-21,zf-RVT|PF13966.2|6.4e+03,zf-RVT|PF13966.2|5e-16 R_Transcript_63843:2130-4892(+)
MLFPLSEVHHEDDGFSDHLPIMLYLNSEGRPPRRKGRHRFKFENMWVGAEGCEEVIQEAWRQGHNWVEAMRRCKEALKEWNENSFGNVQKQIKETQRHLASAVGAMERKQWQVKLRELRRREEILWSQRSRVDFLKHGDNNTKWFHAKASARRKRNYISRLIDSSGNMVENVEDLPRVVVEYFESIFKTENPTNLDHVLNYVQPTVTTEMNEVLCKPYTSEEIFEALRQMHPNKAPGPDDDTIIFAKADATHAGMIMDILGDYERASGQQVNLTKTTTSFSKGVPSHTRQQLCQIMGVVEVPTQDKYLGLPTFIGRSKKKAFTPIKDRIRMKLQGWMDRYLSWSGKEVLIKAVAQVIPTYAMSVFKFPSDFCNEINSLVRKFWWGHKDGKRKIHWVKWERLCRSKDDGGLGFRDISAFNDALLAKQLWRLLCDPTSLCAKVLKARYYASTDILGAELGTRPSYIWRSLWGARATLLKGLQWTVGDGESIRVWKDPWVPRPTTFRPITPMGSHDPDLRVSFLINKEHGKWDEVKLNNIFLPMDADLIKQISLCAQWPPDRLVWHFTPTGIFTVRSAYHASMNERRRDEPVSSASSARSMWKEIWSLDVPPRIRMFGWKALSNALPTKWGLGRRMENVDLGCAVCGASEDTSLHALLWCPLARKAWGEMSRPQWMLDGRYHSVWDWWEEVRTNPSMEDFGIFVAAVWAVWNERCRLLYDEGYKAGGEIIQNASTFVSRYRDARESHGEALQKQRQEQGWTPPSAGMWKLNTDAGKIGDWGVGWGCVVRDSEGEVVALGVHQFRGIMHAEIEEANALLFGMQAAWETGYRKLVVESDCLGLIQKLKNRTPIRSILGYIIDEILSYALKFDFISWNYVCRQGNSVAHNVARLRPYVEEDRFWFEDMPDNIINLARMDFCTCLVN*

Click here to download the sequence:
Link to NCBI Protein BLAST