Transcript Information: R_Transcript_64130.p1


Annotated TAIR IDAT5G35695.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:13869120-13869941 | Forward length=211
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.921020093944
Replicate 227.727171841618
Replicate 323.23554244203
Condition 2: 8 Hour
Replicate 127.883425155236
Replicate 238.837321092585
Replicate 327.618240082694
Condition 3: 24 Hour
Replicate 121.529809648947
Replicate 227.542691724597
Replicate 323.144415003848


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64130.p1 GENE.R_Transcript_64130~~R_Transcript_64130.p1 ORF type:complete len:209 (+),score=23.68,DDE_Tnp_4|PF13359.2|2.1e-22,DDE_Tnp_4|PF13359.2|1.3e+02,DDE_Tnp_1|PF01609.17|8e-07 R_Transcript_64130:1310-1936(+)
ATGCTATTTACATTTTTTGTGGCTGGGTGGCCTGGTTCGGTTCATGACAACCGAATTCTAAAGGATGCACTTGAAGATTCAAAGAAGGTTTTCCCACATCCACCTGAAGGCAAATATTATGTTGTAGATGCTGGTTATCCTAACATGAAAGGATATTTGGCGCCATTTAAAGGTCAAAAATATCATTTACCTGATTTTCGACGCTCTAGCCAACCTCCAACTGGATTTTGTGAAGTGTTCAATTACAATCATGCATCGTTGAGAAATGTAGTTGAGCGCACAATAGGGGTATGGAAAAATCGATGGGCAATTTTGAGAAATATGCCAAGTTTCTCACTTCAAGTGCAAAACAAAATAATCGGAGCTACCATGGCTATACATAATTACATAAGGAGAAATGCATTAGAAGATTTAGAGTTTGACAAGTGCGATGTTGATCCAGATTATATGCCTGATGGGGGAAATGTTGAGACCGATTCTAATATTGTGTATGAAGGTTCCATGGATGATAGAGAAATGGAAAATCATTCGCCATCGAATAGCAGCTTCTTTAATGAAGTGAACATGACATTGCAGTTTTTTAGACATTTTTATTTTTTATTAGTCTATGTTTATTTATTTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64130.p1 GENE.R_Transcript_64130~~R_Transcript_64130.p1 ORF type:complete len:209 (+),score=23.68,DDE_Tnp_4|PF13359.2|2.1e-22,DDE_Tnp_4|PF13359.2|1.3e+02,DDE_Tnp_1|PF01609.17|8e-07 R_Transcript_64130:1310-1936(+)
MLFTFFVAGWPGSVHDNRILKDALEDSKKVFPHPPEGKYYVVDAGYPNMKGYLAPFKGQKYHLPDFRRSSQPPTGFCEVFNYNHASLRNVVERTIGVWKNRWAILRNMPSFSLQVQNKIIGATMAIHNYIRRNALEDLEFDKCDVDPDYMPDGGNVETDSNIVYEGSMDDREMENHSPSNSSFFNEVNMTLQFFRHFYFLLVYVYLFW*

Click here to download the sequence:
Link to NCBI Protein BLAST