Transcript Information: R_Transcript_64163.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value4E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.585151533027
Replicate 211.688944299556
Replicate 317.889355697647
Condition 2: 8 Hour
Replicate 12.0112248913643
Replicate 22.4197564443525
Replicate 31.8459265037682
Condition 3: 24 Hour
Replicate 13.8911537674075
Replicate 22.9905435783834
Replicate 34.7085675010926


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64163.p1 GENE.R_Transcript_64163~~R_Transcript_64163.p1 ORF type:complete len:767 (+),score=83.21,RVT_1|PF00078.23|1.9e-40,zf-RVT|PF13966.2|9.2e+03,zf-RVT|PF13966.2|6.2e-16,zf-RVT|PF13966.2|1.6e+04 R_Transcript_64163:289-2589(+)
ATGCATCCCAGTAAGGCTCCCGGTCTCGATGGTCTAAATGCAAATTTCTTTCAAAAATTCTGGCATATTCTTGGTCACGATATTTCGGATTATGTTATTTCCTTATTGACTGGTGTGAATGACTTTAGCACTGTTAACCATACTCATATTGTTTTAATCCCAAAAGTCAACAAGCCCACGGACATGAAAGAATTTAGGCCAATAAGTTTATGCAATGTCATTTACAAGTTGGCTTCCAAAGTTCTCTCTAACCGATTGAAGCATATTCTACCTCACATTATTTCTAACTCTCAAAGTGCATTTGCTCCGGGGAGATTGATCACAGATAATACTCTAGTTGCTTTCGAAATTTTTCACCATATGCAGAGTATTCGGTCAGGTAACAAAGGGGCTATGACGGTGAAGTTAGATATGAGCAAGGCATATGATCGTGTCGAGTGGACTTTTCTTGAACAAATTATGCTCCGTATGGGATTTTGTGAACAATGGGTATCAAGAATAATGCAATGTGTGTCATCGGTAACCTTTTCGGTTCTCTGCAATGGATTGCCAACAGGACGGTTTACTCCACAGCGAGGGCTCAGACAAGGTGACCCTTTGTCACCTTATCTTTTCATTATTTGCGCTGAAGCTTTCACCAGTCTTATTAGGAACGAAGTCCAAAGGAAATGCTTACGCGCAATCAAGATATGTCGAGGGGCCCCTGAGGTTTCACATCTTCTTTTTGCGGATGATAGTATTATATTTTGTCGGGCACATGAGCGGGATGTGGAGGCTGTCAAGAGGATTCTAAAAATTTACGAGGGTGCTTCTGGCCAATTGGTTAATTTCGAGAAATCGGAAGTGGTGTTTAGCACAGATGTGCAAGCTGATCAACGCCAAAGGGTGGTTGAAGAGCTGGGTGTGAATGAGGTTGTGGGTCTGTCGAAGTACTTGGGAATGCCTATGGGAATAGGGAGATCGAAAGTGGCAAGTTTTAGCCCAATTAAGGAAAGGGTTTGGAAGAAGATTAAAGGGTGGAAGCAACGGGTCATATCCTTTGCAGGTAGAGAGATCCTAATAAAAGCAGTTGCTCAAGCGATCCCTACCTATATGATGAGCCTGTTCAAGCTACCCAAGGGACTATGTCAATCAATCCAAGGGCTAATGGCACGTTTTTGGTGGGGAGGAGACAATGAGAGAAGGAAAATTCACTGGCTAGCATGGAAAAAATTGGCAAGGCCTAAGATGGAAGGGGGCTTGGGATTTCGGCACATAGAGACTTTTAATGAGGCTATGTTGGCAAAGCAGTGTTGGAGAATTCTTAATAACCCCAACTCACTGGTGAGTCAAATGCTGAAAGCAAGGTACTTTCCCACTTGTGAATTTATGCATGCAAAGCTTGGACACCATCCAAGTTATGTTTGGAGGAGTATTTTAGGAGCTAGGTGGATCTTGGAGAAGGGTTGTAGGTGGGTGATAGGGGATGGGGCGCAAGTTAATATTTGGTCAGATCCCTGGCTATTGAAACCTCCAAATTTCAAGCCATTGTCCCCTGTGATTGACAAGGATAGCAATGTTGCGATCTTGATTGACAAGGAGGCTGGGACTTGGAATGAATTTAAAGTGAGACAGATGTTTTTACCTTTCGAGGCAGATGATATCCTTGGCATTCCCCTATGCTCTAGTTTACCATGTGACAAATTAGCATGGCATTATACCAAGGATGGTTTCTACTCAGTCAAATCAGGGTACTACTTTGCTAGATGGGTGAAATATAGTATGGATGAAGCTGCAACCTCTTCCCCTCAGAAGGAACCTTGGAGTGCTATGTGGTGTGTTAATGTGCCACCGAAAATGAGAAGTTTTGCTTGGAGGTTAGCGGTGGGAGCACTGCCAACTCGGGCAAACATAGCCCGAAGAATTCAGGAAGCGGATTCAACATGTTTTCGGTGTGGGGTAGCTAGGGAGACCGATATACATGCAGTCTGTCTATGCCCAGAAGCCTTAGAGATTTGGATGAGATTGGGGCTGGAGGAAGTATTGGAGGATATGGTGTTCGATTCAGCCCTTGATTGGATGGATTACTGGCGTGCCAAACTGACGGAGGAGCGCTTTGAGTACTTTGTGGTAGGTGCTTGGATGGCGTGGAATCGCAGGAATGAAGTGTTGCATGGTAAAGAATGCAGGAGTGTGGAGTGGGACGTACAAGAGAGCATCCAATATATTAAATCCTATAAGGAAGCTAATGTGTCCCCCCAAGAAGTCATTTGGCGCTTGAAGACAAATGGAAATTGCCTCCAACTGGCTACATTAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64163.p1 GENE.R_Transcript_64163~~R_Transcript_64163.p1 ORF type:complete len:767 (+),score=83.21,RVT_1|PF00078.23|1.9e-40,zf-RVT|PF13966.2|9.2e+03,zf-RVT|PF13966.2|6.2e-16,zf-RVT|PF13966.2|1.6e+04 R_Transcript_64163:289-2589(+)
MHPSKAPGLDGLNANFFQKFWHILGHDISDYVISLLTGVNDFSTVNHTHIVLIPKVNKPTDMKEFRPISLCNVIYKLASKVLSNRLKHILPHIISNSQSAFAPGRLITDNTLVAFEIFHHMQSIRSGNKGAMTVKLDMSKAYDRVEWTFLEQIMLRMGFCEQWVSRIMQCVSSVTFSVLCNGLPTGRFTPQRGLRQGDPLSPYLFIICAEAFTSLIRNEVQRKCLRAIKICRGAPEVSHLLFADDSIIFCRAHERDVEAVKRILKIYEGASGQLVNFEKSEVVFSTDVQADQRQRVVEELGVNEVVGLSKYLGMPMGIGRSKVASFSPIKERVWKKIKGWKQRVISFAGREILIKAVAQAIPTYMMSLFKLPKGLCQSIQGLMARFWWGGDNERRKIHWLAWKKLARPKMEGGLGFRHIETFNEAMLAKQCWRILNNPNSLVSQMLKARYFPTCEFMHAKLGHHPSYVWRSILGARWILEKGCRWVIGDGAQVNIWSDPWLLKPPNFKPLSPVIDKDSNVAILIDKEAGTWNEFKVRQMFLPFEADDILGIPLCSSLPCDKLAWHYTKDGFYSVKSGYYFARWVKYSMDEAATSSPQKEPWSAMWCVNVPPKMRSFAWRLAVGALPTRANIARRIQEADSTCFRCGVARETDIHAVCLCPEALEIWMRLGLEEVLEDMVFDSALDWMDYWRAKLTEERFEYFVVGAWMAWNRRNEVLHGKECRSVEWDVQESIQYIKSYKEANVSPQEVIWRLKTNGNCLQLATLK*

Click here to download the sequence:
Link to NCBI Protein BLAST