Transcript Information: R_Transcript_64175.p1


Annotated TAIR IDAT3G26560.1
Annotated Gene NameATP-dependent RNA helicase, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9750122-9753719 | Reverse length=1168
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.473763093255
Replicate 27.4927321073229
Replicate 310.517843828844
Condition 2: 8 Hour
Replicate 111.747778186426
Replicate 213.920136594235
Replicate 318.252372931523
Condition 3: 24 Hour
Replicate 117.714469811702
Replicate 213.152699988671
Replicate 318.381506156562


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64175.p1 GENE.R_Transcript_64175~~R_Transcript_64175.p1 ORF type:complete len:1261 (+),score=301.80,HA2|PF04408.19|2.8e-25,OB_NTP_bind|PF07717.12|1.5e-24,S1|PF00575.19|3e-11,Helicase_C|PF00271.27|3.1e-10,DEAD|PF00270.25|1.3e-06 R_Transcript_64175:238-3783(+)
ATGGCGGCAAAAGAGGGGGAAACCAAAGACGAAGCATTGAAGAAGCTAGAGTACCTATCACTGGTCTCAAAGGTATGTTCCGAACTTGAAACTCACGTAGGGTTTGGCGACAAAGTAGTGGCCGAATTCATCACCGATTTAGGGCATAAATGCGAGACTGTTGATGAATTCGACGCCAAATTGAAGGAAAACGGTGCTGAGATGCCTGATTACTTTGTTCGTACTTTGTTGACTATTATTCATGCTATTTTGCCCCCTAACCCTAACAAGTCTAAAAAGAAGGACGGTGGTGGTGGTGGTGATAGTAATTCGAAGTTTTCAGGGTTGGCTATTGCTGATAGTAGAGATAGGGTTAAGGAGTTGGAGAGAGAGATTGAGATGGAAGCCGATGAACGGCGAAAGAGGGATGGTGGTGATGATGAGAGGAGAGATGATGATGATAGAAAAAATCGACGATATGATAGGGATAGGGATAGGGATAGGGGGAGAGGTAAGGATAGGGATAGAGATTATAGGAGAGAGAGTCGCCATGACAGGTCCGAAAGATATAGGGAAAGAGAGGAGGATATGGGGCATGATGATCGACGACATAGGGGGCGTAGGTATGAGGATGAGGATGGAGGAGATAGGAGGAGGGGTGATAGGAATGGGAGGCATCATCATTGTTCGGAGGAGCTTGAGATGTTTCAGATTTATAAGGGGAGGGTTTCAGGATTGAGCAAGAATGGTTGTTTTGTTCAGTTGCTAGATTTCAAGGGGAAAGAAGGGTTAGTTCATGTTTCACAGATGGCTACTAGGCGAATTGTGAGTCCTACTGATGTTGTTAAGAGGGGTCAGGAGGTTTTTGTGAAGTTGTTATCTGTTAAAGGGGACAAGTTGAGTTTCTCCATGTGTGATGTGGATCAGGATACTGGAAAAGATTTGAAGCCTATCAAGCAGAGGTCAGAGGATGAGGGTTTAAGGGCCAATCCTGCTAGTGGTAGTAATGGGCCAAGAACTAGGACAGGTATTTCGGGGATTAGGATTGTGGAGGAGGATGATTCTGGCCCCTCACGTCGACCTTTGAAGCGGATGAGTTCACCGGAAAAGTGGGAGACTAAGCAGCTTATTGCGTCGGGTGTTTTGAGTGTGAAGGAGCATCCCACTTTTGATGATGAAGGGGATGGGGTGATTTACCAAGAAGAGGGTGCTGAAGAAGAGCTCGAGATAGAGATGAATGAAGATGAACCTCCATTTTTAAATGGGCAGACTCGATATTCTGTTGACATGTCGCCTGTTAAGATTTTTAAGAATCCGGAGGGATCTTTGAGTCGCGCAGCTGCTCTACAGTCTGCTCTGATAAAGGAAAGGAGAGAAGTACGGGAGCAGCAACAGAGAACAATGCTTGATTCAATTCCTAAGGATCTTAATCGTCCGTGGGAAGATCCCATGCCCGAGACAGGGGAGAGGCATCTTGCGCAGGAGCTGAGGGGTGTTGGCTTATCAGCATATGATATGCCAGAATGGAAGAAGGAAGCCTACGGTAAGGCTCTGACTTTTGGGCAGAAATCCAAGCTCTCAATCCAGGAACAAAGGCAGAGCTTGCCAATCTACAAGTTAAAGAAAGAACTGATTCAAGCTGTGCACGATAATCAGGTTCTAGTTGTGATTGGTGAGACCGGATCAGGGAAAACAACCCAGGTAACTCAATACCTTGCTGAAGCAGGTTACACCACTAGGGGTAAAATTGGATGTACTCAGCCCCGTCGTGTAGCTGCTATGTCTGTGGCCAAGAGGGTTGCTGAGGAGTTTGGATGTCGATTAGGAGAGGAGGTTGGATATGCTATTCGGTTTGAGGACTGTACTGGTCCTGACACTGTGATTAAGTATATGACTGATGGTATGCTTCTTAGGGAAATCCTGATTGATGAAAATCTTGCTCAGTACTCAGTAATAATGCTTGATGAAGCTCACGAGAGAACTATACATACAGATGTCCTTTTTGGTCTATTGAAAAAGCTTGTTAGAAGGAGGCCTGATCTTCGTTTGATTGTCACATCAGCTACTTTGGATGCTGAGAAGTTTTCTGGATATTTCTTCAACTGTAATATCTTCACTATCCCCGGAAGAACTTATCCTGTGGAGATTTTGTATACTAAGCAACCTGAGACTGATTATCTGGATGCCGCTTTAATCACTGTGCTGCAAATACACCTGACAGAACCTGAAGGTGACGTTCTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCTTGCCAGTGTCTCTATGAAAGGATGAAAGCCCTAGGAAAAAATGTTCCTGAACTGATAATTCTTCCAGTTTACAGTGCTCTTCCTAGCGAAATGCAATCTAGGATTTTCGAGCCTGCCCCTCCTGGAAAAAGGAAAGTAGTTGTGGCTACAAACATTGCGGAAGCTTCTTTGACCATTGATGGGATATTTTATGTGGTTGACCCTGGATTTGCTAAGCAGAATGTATATAACCCAAAACAGGGGCTTGATTCCTTGGTTATTACCCCAATTTCACAAGCATCTGCCAAGCAAAGAGCTGGTCGTGCTGGGCGTACTGGACCTGGTAAATGCTATCGTCTTTATACAGAGAGTGCCTACAAAAACGAAATGTCTCCAACCTCAATTCCAGAAATTCAGCGGATAAATCTTGGGATGACGACACTGACCATGAAAGCTATGGGGATCAATGATCTGCTGTCCTTTGATTTTATGGATCCGCCTCCTCCTCAAGCACTTATTTCTGCTATGGAGCAGTTGTATAGTCTCGGAGCTTTGGATGAGGAAGGCCTTTTGACCAAATTGGGCCGGAAGATGGCAGAATTTCCCTTGGAACCACCGCTGTCTAAGATGCTGCTGGCCAGTGTTGACCTTGGATGCAGTGATGAGATTTTGACGATAATTGCAATGATCCAAACAGGGAATATCTTCTACAGGCCCAGGGAGAAGCAAGCACAAGCAGACCAAAAGAGGGCCAAATTTTTCCAGCCGGAGGGCGATCATCTGACATTGCTTGCTGTTTACGAGGCTTGGAAAGCGAAGAATTTTTCTGGACCATGGTGCTTTGAAAATTTCATCCAGTCTCGATCATTGAGAAGGGCACAAGATGTCAGGAAACAACTTCTCAGTATCATGGACAAGTATAAACTGGATGTCGTAAGCGCTGGTAAGAATTTCACCAAGATAAGGAAGGCGATTGCTGCTGGTTTTTTCTTTCATGCTTCCAGGAAGGATCCACAGGAAGGCTACAGAACCCTGGTCGAGAATCAGCCTGTTTACATCCACCCTAGCAGTGCATTGTTTCAGAGACAGCCAGATTGGGTCATATACCATGAGCTGGTTATGACCACAAAAGAATATATGAGGGAGGTGACTGTCATTGACCCTAAGTGGCTGGTTGAGTTAGCTCCTAGATTTTTCAAAGTAGCAGATCCCACAAAAATGAGCAAGCGCAAGCGTCAAGAACGTATTGAGCCACTTTATGATAGATATCATGAGCCTAACTCATGGCGTCTAAGCAAAAGGCGTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64175.p1 GENE.R_Transcript_64175~~R_Transcript_64175.p1 ORF type:complete len:1261 (+),score=301.80,HA2|PF04408.19|2.8e-25,OB_NTP_bind|PF07717.12|1.5e-24,S1|PF00575.19|3e-11,Helicase_C|PF00271.27|3.1e-10,DEAD|PF00270.25|1.3e-06 R_Transcript_64175:238-3783(+)
MAAKEGETKDEALKKLEYLSLVSKVCSELETHVGFGDKVVAEFITDLGHKCETVDEFDAKLKENGAEMPDYFVRTLLTIIHAILPPNPNKSKKKDGGGGGDSNSKFSGLAIADSRDRVKELEREIEMEADERRKRDGGDDERRDDDDRKNRRYDRDRDRDRGRGKDRDRDYRRESRHDRSERYREREEDMGHDDRRHRGRRYEDEDGGDRRRGDRNGRHHHCSEELEMFQIYKGRVSGLSKNGCFVQLLDFKGKEGLVHVSQMATRRIVSPTDVVKRGQEVFVKLLSVKGDKLSFSMCDVDQDTGKDLKPIKQRSEDEGLRANPASGSNGPRTRTGISGIRIVEEDDSGPSRRPLKRMSSPEKWETKQLIASGVLSVKEHPTFDDEGDGVIYQEEGAEEELEIEMNEDEPPFLNGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLAQYSVIMLDEAHERTIHTDVLFGLLKKLVRRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTYPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQCLYERMKALGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVVDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYKNEMSPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPPPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAIAAGFFFHASRKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA*

Click here to download the sequence:
Link to NCBI Protein BLAST