Transcript Information: R_Transcript_64199.p1


Annotated TAIR IDAT1G58060.1
Annotated Gene NameRNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21489480-21501775 | Reverse length=1459
E-Value8E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91712181267582
Replicate 20.66899976816636
Replicate 30.87023145279501
Condition 2: 8 Hour
Replicate 10.42010062409489
Replicate 20.32883649766449
Replicate 31.0899864220575
Condition 3: 24 Hour
Replicate 11.5474012224556
Replicate 20.67571258855935
Replicate 30.91198769528739


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64199.p1 GENE.R_Transcript_64199~~R_Transcript_64199.p1 ORF type:complete len:816 (+),score=216.13,DEAD|PF00270.25|1.6e+03,DEAD|PF00270.25|3e-05 R_Transcript_64199:79-2526(+)
ATGGCTCCAAAGAAGAAGCAACAACAGTCGAAAAAGAGCTCCAATAAAGGTCAATCATCATCGGCAGGCCCAAAACTTCAAATATCTGCCGAAAATGAGCAGAGGCTTCGCCGTTTACTTCTCAACAACAACAACAACAACCGCCCTTCTGCATCAACCACCACAACAACCGATGATTCTCATTCTTTATCCAAAGCTCAGAAGGCCAAGAAACTGAAGTCCATTTATGAGAAGCTCTCTTGTGAAGGTTTCTCTGATGATCACATTGAACGTGCTCTTTCTGCTCTCAAGGATGGTGCAACATTTGAAGCTGCTCTTGATTGGTTGTGCTTCAATTTGTCACGCAATGAACTACCGATGAAATTTCGTGATGGCTCATCTTTGCATACTGGAGGGTCTGTTGGTGTCATATCGACGGCACAAGAAAATTGGATTCCCCAGGTTGATACAACGTGTAGCTCTGATGATGAGGCTTCTAAGTTTTCTGTCATAAACAAAGGTTGTCGTGATGATGATGCTTTGGTTTTGCAAGAGCCATCTCAAGCTGATTGGATTCGTCAGTACATGGAGAAAGAGGAAGAGATGGAATCTGAAACTTGGGAAGACACATTGTTAGATGAAGGTTCAGACAAAAAGGCTGCCGAACCTAGGTCGTATGATACAATTGTCAAGGAGTACCAAGCTGCTAGACGTGAAGCTATAACTGCCAAAGAGAAACGGGACAAGCAAAGCCAGGAAGCTGCAAGCAAAAGAATCCGCGCACTGAAACAGGAGATGTCAGCTTTAGGGATATCTGAATCTGAGATTGTTGATTGGGAGACAACGCCTCGATACAAAGAACAAAACTTTTCTTCCGTTGCAGCAACAAATTCGATAGTTGGTGAAAATGTGATGGGGCATTTCTTAATGGATGAGAAAACAGTAGAATCATCAAGTATTTCTGTCAAGGAAGATGCATCATTAGAAAGAGAAATGGAAGACACAGAGCTTGGTAATTTCTTCACGGAAGATGACCCATTGAACACCAATTTACCTCTTGAAGTCATGAAGATACATAACAAAAGCAAAGCAAGAGCATTACTAATTGAAAAAGCTTCAGAAAAGTTGGAGGGTATATGGAAGAAGGGTGATCCAAAAAAGATTCCTAAGGCTGTTCTTCATCAAATGTGCCAAAGATCAGGCTGGGACCCTCCAAAATTTGACAAAGCTGGTAGGAAAGAAAGTGGCTTCAGTTACACTGTTAGTGTAGTTCGTAAAGCTACTGGGAGGGGCAAGAGTAGAAAATCTGGTGGTTTGATCACCCTGCAGCTACCTAGACAGGATCAAACATTTGAATCTGCTGAGGAAGCACAGAATAAAGTAGCAGCTTATGCTCTTTGGCGCTTGTTTCCTGATATACCTGTCGAGTTGCTAATTAGAGAGCCATATGATTCCCTCGTTACGAAATGGGAGGAAGGGGAATCATCAAGCACAGTTGAAGATACTCTGGAAGATCGAAGGGCGGGGTTTGTGGATTCATTATTAAACACTGATTCCTCCGTGGTGATGACTTCGGTTGATGTTGGTGATAGTAATGAGCATGAGTTTTCAGTGTCACGTGGTGAAGAATTCACTTATGCTGATGTCCAGAGAGATAACCCTCTGAAAGAAAAGGAGAGTTTCTTTCTAAGACAAGAACTACAAAAAAAACATAAGTTACAGAGATACAAGAGTATGTTAGAAGCCAGAGCAGCACTTCCTATTGCTAAATCAAAGGACGAAATGTTGCGCCAGCTAAAGAAGAATAATGTCCTGGTCATTTGTGGAGAAACAGGTTCTGGGAAGACAACTCAGGTCCCACAATATATATTGGATGACATGATTGCGGCTGGTCATGGTGGATATTGCAACATCATCTGTACACAACCACGGAGAATAGCGGCTATTTCTGTTGCTGAAAGGGTTGCTGAAGAGAGATGTGAACCTGCACCAGGTTTGGATGGATCATTGGTTGGTTATCAAGTTCGTCTAGATAGCGCAAGGAATGATCAAACTAAGCTCCTCTTCTGTACGACTGGTATCCTCTTACGTCGAATTGCGGCAAACAGGAGCTTCCACGGTGTTACACATGTTATAGTTGATGAGGTGCATGAACGATCTTTATTGATGATGTTGTATGGTGCAATGTTTGGTTGTCTCTCGCCAATCTTGTCAATTTCAGCATTTCTGAGCCACAAGTCACCTTTTGTTCACTCCAAAGATGAGAGGGAATCTGTTGAAAGATCAAAATTGGCCATTTTGATAGACAAGACAGATGGATCACGTGATCCAGTTGATTATGAGAGGCAGTCTGATCACATCATAATGATGATTGCATACAAAAAATGGGAAAGCATTCTAAAAGATGAGCTAAAGCTGCACAAAATTTCTGCAAGTCATACTCTCTTAGCAGCTCAGTTATGCACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64199.p1 GENE.R_Transcript_64199~~R_Transcript_64199.p1 ORF type:complete len:816 (+),score=216.13,DEAD|PF00270.25|1.6e+03,DEAD|PF00270.25|3e-05 R_Transcript_64199:79-2526(+)
MAPKKKQQQSKKSSNKGQSSSAGPKLQISAENEQRLRRLLLNNNNNNRPSASTTTTTDDSHSLSKAQKAKKLKSIYEKLSCEGFSDDHIERALSALKDGATFEAALDWLCFNLSRNELPMKFRDGSSLHTGGSVGVISTAQENWIPQVDTTCSSDDEASKFSVINKGCRDDDALVLQEPSQADWIRQYMEKEEEMESETWEDTLLDEGSDKKAAEPRSYDTIVKEYQAARREAITAKEKRDKQSQEAASKRIRALKQEMSALGISESEIVDWETTPRYKEQNFSSVAATNSIVGENVMGHFLMDEKTVESSSISVKEDASLEREMEDTELGNFFTEDDPLNTNLPLEVMKIHNKSKARALLIEKASEKLEGIWKKGDPKKIPKAVLHQMCQRSGWDPPKFDKAGRKESGFSYTVSVVRKATGRGKSRKSGGLITLQLPRQDQTFESAEEAQNKVAAYALWRLFPDIPVELLIREPYDSLVTKWEEGESSSTVEDTLEDRRAGFVDSLLNTDSSVVMTSVDVGDSNEHEFSVSRGEEFTYADVQRDNPLKEKESFFLRQELQKKHKLQRYKSMLEARAALPIAKSKDEMLRQLKKNNVLVICGETGSGKTTQVPQYILDDMIAAGHGGYCNIICTQPRRIAAISVAERVAEERCEPAPGLDGSLVGYQVRLDSARNDQTKLLFCTTGILLRRIAANRSFHGVTHVIVDEVHERSLLMMLYGAMFGCLSPILSISAFLSHKSPFVHSKDERESVERSKLAILIDKTDGSRDPVDYERQSDHIIMMIAYKKWESILKDELKLHKISASHTLLAAQLCT*

Click here to download the sequence:
Link to NCBI Protein BLAST