Transcript Information: R_Transcript_64246.p1


Annotated TAIR IDAT3G57930.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21447250-21447675 | Reverse length=141
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1337242829018
Replicate 20.26082360765588
Replicate 30.99594511287619
Condition 2: 8 Hour
Replicate 11.9771195299018
Replicate 21.8055370430771
Replicate 31.1274292310799
Condition 3: 24 Hour
Replicate 12.5667113670725
Replicate 21.0959134852461
Replicate 32.4470725736904


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64246.p1 GENE.R_Transcript_64246~~R_Transcript_64246.p1 ORF type:internal len:161 (+),score=55.60,AT_hook|PF02178.15|0.079,AT_hook|PF02178.15|0.068,AT_hook|PF02178.15|0.068,AT_hook|PF02178.15|0.28 R_Transcript_64246:2-481(+)
GAAATGGATGAAGTCAAAGTGGCTTCTAAAGCTGAAGATGAAGATGCAGGTTGTAAGTCAGTTAGCACCTTAAAAAAGAAGGATGGACGTGGAAGGCCCAGGAAATATGTACAGGAGACAGTGGAAATGGATGAAGTCAAAGTGGTTTCTAAAGCTGAAGATAAAGATTCAGGATGTAAGTCAGTCAGCACTTTAAAAAAGAAGGATGGACGTGGAAGGCCCAGGAAATATGTAGAGGAGACAGTGGAAATGGATGAAATCAAAGTGGCTTCTAAAGCTGAATATGAAGATGCTGGTTTTAAGTCATCTAGCAGTTTAAAAAAGAAGGATGGACGTGGAAGGCCCAGGAAATATGTAGAGGAGACAGTGGAAATGGATGAAATCAAAGTGGCTTCTAAAGCTGAATATGAAGATGCTGGTTTTAAGTCATCTAGCAGTTTCAAAAAGAAGGATGGACGTGGAAGGCCCAGGAAATATGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64246.p1 GENE.R_Transcript_64246~~R_Transcript_64246.p1 ORF type:internal len:161 (+),score=55.60,AT_hook|PF02178.15|0.079,AT_hook|PF02178.15|0.068,AT_hook|PF02178.15|0.068,AT_hook|PF02178.15|0.28 R_Transcript_64246:2-481(+)
EMDEVKVASKAEDEDAGCKSVSTLKKKDGRGRPRKYVQETVEMDEVKVVSKAEDKDSGCKSVSTLKKKDGRGRPRKYVEETVEMDEIKVASKAEYEDAGFKSSSSLKKKDGRGRPRKYVEETVEMDEIKVASKAEYEDAGFKSSSSFKKKDGRGRPRKYV

Click here to download the sequence:
Link to NCBI Protein BLAST