Transcript Information: R_Transcript_64286.p1


Annotated TAIR IDAT5G09860.1
Annotated Gene Namenuclear matrix protein-related
Annotated Gene Symbol(s)AtTHO1, THO1, AtHPR1, HPR1
Annotation TypeOrtholog
Chromosome Positionchr5:3066815-3070733 | Forward length=599
E-Value4.6E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3114839753365
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.0864035642122
Replicate 21.0684380401932
Replicate 32.2612074663622
Condition 3: 24 Hour
Replicate 11.4887315267112
Replicate 22.2958545944116
Replicate 32.2784129452231


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64286.p1 GENE.R_Transcript_64286~~R_Transcript_64286.p1 ORF type:complete len:586 (+),score=136.39,efThoc1|PF11957.4|3.3e-51,efThoc1|PF11957.4|4.3e-31 R_Transcript_64286:206-1963(+)
ATGGAAATATTTAGGAGCGCGTTATTGAATCCAGGGCCACCTGAGAGTTTTGCCCTACAAACTGTGCAGGAAGCCATTAAACCTCAGAGGCAAACAAAATTAGTTCTGGATGAGAATCAGTTATTGGAGAACATATTACGGACATTACTTCAAGAATTGGTGGCATGTGCAGTACAGTCTGGGGAACCGATTATGCAATATGGTCGGTCCATCGCTGATGGCGATATTGCACAGGGTCAAATTCCTCGTCTTCTAGACATTGTATTGTACCTGTGTGAGAAAGAACATGTGGAGGGTGGCATGATATTTCAGCTGTTGGAGGATTTGACTGAAATGTCTACCATGAAAAATTGCAAAGACATTTTTGCGTATATAGAGAGCAAACAAGACATACTTGGAAAGCAAGAGCTGTTTGCACGAGGGAAACTTGTAATGTTGAGGACATGCAATCAGCTGCTTCGCCGTCTGTCAAAGGCTAATGATGTGGTGTTTTGTGGACGGATTCTTATGTTTCTGGCACATTTCTTCCCATTGTCTGAGCGCTCAGCTGTCAATATTAAGGGAGTTTTCAATACGTCCAATCAAACAAAGTTTGAGAAGGATGCACCTGATGGCATTTCTATCGATTTCAACTTCTACAAGACATTCTGGAGTTTACAGGAGTATTTTTATAACCCTCCTTCCTTGACTATGAATCTGACAAAGTGGCACAGATTTACATCCAGCTTAATGGTTGTACTAAACACCTTTGAGGCTCAACCCTTGAGTGATGAAGAAGGAAATGCTACTAATATTGAAGAAGAGGGGGCAGCTTTCAATATAAAATATCTTACCAGTAGTAAACTGATGGGTCTGGAGGCCCCTGGTAAGAGTGACAAAGATTCGCCAAGTGAAGCAATGAAAGAAGAAATCAGAACCTGTGAAGAGCGTGTAAAGAAGCTTCTTGAAGTGACTCCTCCAAAGGGAAAAGAGTTTCTGAATAGTGTTGATCATATCTTAGAACGTGAAAAAAATTGGGTATGGTGGAAACGTGATGGCTGCCCACCATTTGAAAAACAACCAGTGGAGATGAAGGTTGATGGTGTAAAGAAACGTCGAGCAAAGTGGAGAATGGGGAACAAGGAACTTTCTCAGCTGTGGAAATGGGCGGATCAAAATCCGAATGCTCTCACTGATCCGGATCGTGTTCGGACTCCTTTAATCATGGATTACTGGAAACCGCTGGCTGAAGATATGGATGAATCTGCTGGTATAGAGGCCGAATATCATCACAAGAACAACAAGGTCTATTGTTGGAAAGGTCTTCGCTTTTCAGCTCGACAGGACTTGGAAGGATTTTCTAGATTTACAGAATTTGGTATTGAAGGGGTTGTGCCTCTAGAACTTTTGCCTATTGAGGTGAGGTCAAAATATCAGGCAAAACCAAATGAGAAGTCTAAACGTGCCAAGAAGGATGATGCTAAGGGTTCTGCACCTCCATTAGAAGATAATCAGAGCACAATTCCTGCAAGTGAGATGGATGGTGAATGTGGCAGAACTGATCTTGAAGCTCCATCAGCACGGGTGGACATGGATTCCACACCTGTAACAGGCAACAATTCTCAAGGTGGCACCCCGACACCAGAGGATCATCAAAAGCAGAGTTCGGGAACCCCCGAGGCACCAGAAGCAGGACAACTAGAAACAGATGCAGAGGCTGAGCCGGGGATGATTGACGGGGAGACAGATGCTGATGTTGATTTAGAAGCAGTAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64286.p1 GENE.R_Transcript_64286~~R_Transcript_64286.p1 ORF type:complete len:586 (+),score=136.39,efThoc1|PF11957.4|3.3e-51,efThoc1|PF11957.4|4.3e-31 R_Transcript_64286:206-1963(+)
MEIFRSALLNPGPPESFALQTVQEAIKPQRQTKLVLDENQLLENILRTLLQELVACAVQSGEPIMQYGRSIADGDIAQGQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDIFAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNQTKFEKDAPDGISIDFNFYKTFWSLQEYFYNPPSLTMNLTKWHRFTSSLMVVLNTFEAQPLSDEEGNATNIEEEGAAFNIKYLTSSKLMGLEAPGKSDKDSPSEAMKEEIRTCEERVKKLLEVTPPKGKEFLNSVDHILEREKNWVWWKRDGCPPFEKQPVEMKVDGVKKRRAKWRMGNKELSQLWKWADQNPNALTDPDRVRTPLIMDYWKPLAEDMDESAGIEAEYHHKNNKVYCWKGLRFSARQDLEGFSRFTEFGIEGVVPLELLPIEVRSKYQAKPNEKSKRAKKDDAKGSAPPLEDNQSTIPASEMDGECGRTDLEAPSARVDMDSTPVTGNNSQGGTPTPEDHQKQSSGTPEAPEAGQLETDAEAEPGMIDGETDADVDLEAVG*

Click here to download the sequence:
Link to NCBI Protein BLAST