Transcript Information: R_Transcript_64289.p1


Annotated TAIR IDAT5G09860.1
Annotated Gene Namenuclear matrix protein-related
Annotated Gene Symbol(s)AtTHO1, THO1, AtHPR1, HPR1
Annotation TypeOrtholog
Chromosome Positionchr5:3066815-3070733 | Forward length=599
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.483834966468
Replicate 217.266694421298
Replicate 316.87864875506
Condition 2: 8 Hour
Replicate 116.431304109336
Replicate 220.632326830436
Replicate 322.450676293637
Condition 3: 24 Hour
Replicate 122.2781353032
Replicate 218.24637372033
Replicate 321.059715858281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64289.p1 GENE.R_Transcript_64289~~R_Transcript_64289.p1 ORF type:complete len:608 (+),score=139.92,efThoc1|PF11957.4|4.5e-99 R_Transcript_64289:206-2029(+)
ATGGAAATATTTAGGAGCGCGTTATTGAATCCAGGGCCACCTGAGAGTTTTGCCCTACAAACTGTGCAGGAAGCCATTAAACCTCAGAGGCAAACAAAATTAGTTCTGGATGAGAATCAGTTATTGGAGAACATATTACGGACATTACTTCAAGAATTGGTGGCATGTGCAGTACAGTCTGGGGAACCGATTATGCAATATGGTCGGTCCATCGCTGATGGCGATATTGCACAGGGTCAAATTCCTCGTCTTCTAGACATTGTATTGTACCTGTGTGAGAAAGAACATGTGGAGGGTGGCATGATATTTCAGCTGTTGGAGGATTTGACTGAAATGTCTACCATGAAAAATTGCAAAGACATTTTTGCGTATATAGAGAGCAAACAAGACATACTTGGAAAGCAAGAGCTGTTTGCACGAGGGAAACTTGTAATGTTGAGGACATGCAATCAGCTGCTTCGCCGTCTGTCAAAGGCTAATGATGTGGTGTTTTGTGGACGGATTCTTATGTTTCTGGCACATTTCTTCCCATTGTCTGAGCGCTCAGCTGTCAATATTAAGGGAGTTTTCAATACGTCCAATCAAACAAAGTTTGAGAAGGATGCACCTGATGGCATTTCTATCGATTTCAACTTCTACAAGACATTCTGGAGTTTACAGGAGTATTTTTATAACCCTCCTTCCTTGACTATGAATCTGACAAAGTGGCACAGATTTACATCCAGCTTAATGGTTGTACTAAACACCTTTGAGGCTCAACCCTTGAGTGATGAAGAAGGAAATGCTACTAATATTGAAGAAGAGGGGGCAGCTTTCAATATAAAATATCTTACCAGTAGTAAACTGATGGGTCTGGAGTTGAAAGATCCTAGTTTTCGGCGTCATGTTCTTGTGCAGTGCTTGATGTTGTTCAATTATCTGAAGGCCCCTGGTAAGAGTGACAAAGATTCGCCAAGTGAAGCAATGAAAGAAGAAATCAGAACCTGTGAAGAGCGTGTAAAGAAGCTTCTTGAAGTGACTCCTCCAAAGGGAAAAGAGTTTCTGAATAGTGTTGATCATATCTTAGAACGTGAAAAAAATTGGGTATGGTGGAAACGTGATGGCTGCCCACCATTTGAAAAACAACCAGTGGAGATGAAGGTTGATGGTGTAAAGAAACGTCGAGCAAAGTGGAGAATGGGGAACAAGGAACTTTCTCAGCTGTGGAAATGGGCGGATCAAAATCCGAATGCTCTCACTGATCCGGATCGTGTTCGGACTCCTTTAATCATGGATTACTGGAAACCGCTGGCTGAAGATATGGATGAATCTGCTGGTATAGAGGCCGAATATCATCACAAGAACAACAAGGTCTATTGTTGGAAAGGTCTTCGCTTTTCAGCTCGACAGGACTTGGAAGGATTTTCTAGATTTACAGAATTTGGTATTGAAGGGGTTGTGCCTCTAGAACTTTTGCCTATTGAGGTGAGGTCAAAATATCAGGCAAAACCAAATGAGAAGTCTAAACGTGCCAAGAAGGATGATGCTAAGGGTTCTGCACCTCCATTAGAAGATAATCAGAGCACAATTCCTGCAAGTGAGATGGATGGTGAATGTGGCAGAACTGATCTTGAAGCTCCATCAGCACGGGTGGACATGGATTCCACACCTGTAACAGGCAACAATTCTCAAGGTGGCACCCCGACACCAGAGGATCATCAAAAGCAGAGTTCGGGAACCCCCGAGGCACCAGAAGCAGGACAACTAGAAACAGATGCAGAGGCTGAGCCGGGGATGATTGACGGGGAGACAGATGCTGATGTTGATTTAGAAGCAGTAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64289.p1 GENE.R_Transcript_64289~~R_Transcript_64289.p1 ORF type:complete len:608 (+),score=139.92,efThoc1|PF11957.4|4.5e-99 R_Transcript_64289:206-2029(+)
MEIFRSALLNPGPPESFALQTVQEAIKPQRQTKLVLDENQLLENILRTLLQELVACAVQSGEPIMQYGRSIADGDIAQGQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDIFAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNQTKFEKDAPDGISIDFNFYKTFWSLQEYFYNPPSLTMNLTKWHRFTSSLMVVLNTFEAQPLSDEEGNATNIEEEGAAFNIKYLTSSKLMGLELKDPSFRRHVLVQCLMLFNYLKAPGKSDKDSPSEAMKEEIRTCEERVKKLLEVTPPKGKEFLNSVDHILEREKNWVWWKRDGCPPFEKQPVEMKVDGVKKRRAKWRMGNKELSQLWKWADQNPNALTDPDRVRTPLIMDYWKPLAEDMDESAGIEAEYHHKNNKVYCWKGLRFSARQDLEGFSRFTEFGIEGVVPLELLPIEVRSKYQAKPNEKSKRAKKDDAKGSAPPLEDNQSTIPASEMDGECGRTDLEAPSARVDMDSTPVTGNNSQGGTPTPEDHQKQSSGTPEAPEAGQLETDAEAEPGMIDGETDADVDLEAVG*

Click here to download the sequence:
Link to NCBI Protein BLAST