Transcript Information: R_Transcript_6431.p1


Annotated TAIR IDAT1G55000.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20514762-20516166 | Forward length=221
E-Value1.1E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 172.015095097798
Replicate 250.950066880505
Replicate 360.902213608883
Condition 2: 8 Hour
Replicate 152.983066131582
Replicate 267.845815552266
Replicate 364.305023289972
Condition 3: 24 Hour
Replicate 168.324941646956
Replicate 254.498318896853
Replicate 360.508671660023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6431.p1 GENE.R_Transcript_6431~~R_Transcript_6431.p1 ORF type:complete len:293 (+),score=15.82,LysM|PF01476.16|8.9e-06,F-box-like|PF12937.3|1.1e-05 R_Transcript_6431:104-880(+)
ATGGGGTGCTGTGGAGACGAACAAGAAGACGATAACCTCCACGAACCCCTCATCAACCCTACCACCACCTCTCCCGAATCCCTAGAAACCATAATTTCACCAATGAACTCGAATTTCGCAGCCCTAATTTGCAGAGATACGCTCCGTATCATCTTCGAGAAGCTTCCGATCGCCGATTTAGCTCGAGCTGCTTGCGTGTGCCGTCTATGGTCCTCGATCGCCTCCGATCGTGAAATCCAAACGGCGTCGTTTATTGCGCCTTGGAAATTGAAGGAGATTGTCGGTGATCCGAGTTCTGGAAGCTTCTGGAGAGATAATTGCTTGAACAAGTTCGCCATTTCCCATCGCCTTGTTCGCGGTGATTCTCTCGCTAGCCTTGCCGTTAAGTACTCCGTTCAGGTTATGGACATAAAACGACTGAACAACATGATGAGTGACCATGGCATATATTCACGGGAAAGATTGCTCATCCCTGTGAGCAATGCAGACATCCTTATCAACAGTACATGCTACATAGAGCTGGACTTTTACGCAAAAAGAGAAGTGGCAGTGTTATATCTAGAGGGAGGACCAGAAGGTAAAACGTCCCGCTACTCACCTGGTAGGGTGAGCTCCGAACATGGTAAGAGAAGAGTGATTGAATCCCTGAGGAGGAGCATGCAAGTCGATGATGGAACTGCTCTGTATTATTTGTCTATATCAGATGGTGACCCTCGAGCTGCACTTTCAGAGTTCTCAGATGACATCAGATGGGAAAGGCAAGCAGGCGTCACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6431.p1 GENE.R_Transcript_6431~~R_Transcript_6431.p1 ORF type:complete len:293 (+),score=15.82,LysM|PF01476.16|8.9e-06,F-box-like|PF12937.3|1.1e-05 R_Transcript_6431:104-880(+)
MGCCGDEQEDDNLHEPLINPTTTSPESLETIISPMNSNFAALICRDTLRIIFEKLPIADLARAACVCRLWSSIASDREIQTASFIAPWKLKEIVGDPSSGSFWRDNCLNKFAISHRLVRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPVSNADILINSTCYIELDFYAKREVAVLYLEGGPEGKTSRYSPGRVSSEHGKRRVIESLRRSMQVDDGTALYYLSISDGDPRAALSEFSDDIRWERQAGVT*

Click here to download the sequence:
Link to NCBI Protein BLAST