Transcript Information: R_Transcript_64430.p1


Annotated TAIR IDAT1G31360.1
Annotated Gene NameRECQ helicase L2
Annotated Gene Symbol(s)RECQL2, ATRECQ2, MED34
Annotation TypeOrtholog
Chromosome Positionchr1:11232422-11237412 | Forward length=705
E-Value4.3e-319
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8185264058785
Replicate 22.5694773236728
Replicate 33.684300452528
Condition 2: 8 Hour
Replicate 13.76705614573
Replicate 23.2837658647895
Replicate 34.9821728451062
Condition 3: 24 Hour
Replicate 14.7761871680014
Replicate 23.6630237667917
Replicate 34.5918261580903


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64430.p1 GENE.R_Transcript_64430~~R_Transcript_64430.p1 ORF type:3prime_partial len:572 (+),score=130.98,DEAD|PF00270.25|4.7e-19,DEAD|PF00270.25|5.8e+02,DEAD|PF00270.25|2.3e+03,Helicase_C|PF00271.27|6.1e+03,Helicase_C|PF00271.27|9.7e+02,Helicase_C|PF00271.27|5.8e-17,Helicase_C|PF00271.27|1.6e+04,RecQ_Zn_bind|PF16124.1|6.2e-12,RecQ_Zn_bind|PF16124.1|1.6e+04 R_Transcript_64430:176-1888(+)
ATGGATGCTACAAATCAGATACTGGGAGAGTTGCTGAATGTTGAAGCAGAGCTTCAAGATGTTCAAGATCAGATAAAAGCACTCCTTGATCAGCAAGAGATGTTGTATGCTAGACAATCTGAGCTGAAAGCGCTCCTTAATGATTGTGAAGCATCAGGAAGCCAGTGTGATGATGGTGGCTCGACAGTTGAGGAGAACTGGTCAGCATCCTTTGAGTGGGATTCTCAAGCTGATGATCTCCGACTAAACATTTTTGGGATATCCTCCTATCGTGCAAACCAACGGGAGATAATTAATGCAGTCATGAGTGGAAGAGATGTGTTGGTGATTATGGCTGCAGGTGGTGGAAAAAGTCTTTGTTATCAGCTTCCAGCTATTCTTCGTGATGGAATTGCCCTTGTAGTCAGTCCTTTACTTTCTCTAATTCAAGATCAGGTCATGGGTCTTACAGCGCTAGGAATTCCAGCAAACATGCTGACTTCAACTACTAGCAAGGAGGATGAGAAGTTCATTTACAAGGCTCTTGAAAAAAATGAAGGAGAACTCAAAATATTGTATGTCACTCCTGAGAAAATATCAAAGAGCAAAAGATTTATGTCTAAGCTTGAAAAGTGCCACCATGGTGGTCGTCTCTCACTGATAGCAATAGATGAGGCGCATTGCTGCAGTCAGTGGGGTCATGATTTTCGTCCTGACTACAAGAACCTTGGTATTTTGAAGACTCAGTTTCCAACTGTTCCTGTGATTGCTTTGACGGCAACTGCTACTAGGAAAGTCCAACTTGATCTGATGGAGATGTTGCATATACCAAAAAGTGTAAAATTTGTCAGCACTGTGAACAGGCCAAATTTGTTTTATATGGTGAGGGAGAAGTCCTCAGTTGGAAAAGTTGTGGTTGATGAAATTGCTGAATTTATTAAAGGATCATATCCAAATAATGAATCTGGAATAGTTTATTGCTTCTCTAGAAAGGAATGCGAGCAGGTTGCCAAGGAATTACGTGAGCGAGGAATTAAAGCTGATCATTACCATGCTGATATGGATATAAGAGACCGTGAAAATGTTCACATGCGGTGGAGCAACAGCAAATTGCAGGTCATTGTTGGCACGGTGGCATTTGGCATGGGAATTAACAAACCAGATGTCAGGTTTGTCATTCATCACAGTCTGAGCAAATCTATGGAGACGTATTACCAGGAAAGTGGTCGTGCTGGACGTGATGGACTTCCAGCAGAATGCTTACTCTATTATAGGCCAGCTGATGTACCTAGACAGAGTTCAATGGTTTTCTATGAGAACTCTGGTTTGCAGAATCTCTACGACATAGTCCAGTACTGCCAGTCCAGAAGTGAATGTCGCCGAGCTGCAATTTTTAGGCACTTTGCTGAGCCACTAGGAGATTGCAATGGAATGTGTGACAACTGTGTATCTTCAACTGAGTTCAAGGATGTTGATGCCTCTGGTCATGCAAAGGCTATGATTTCTTTAATACAAGATATACAAGAAAATGATCAGAGAATCACAATGTTGCAATTAGTTGACAAAATGAAGGTTAAACAGAAAGAACTACGAGTGGACCTAAAAAGAGATCACATGGAGCAGCTTGTCATTCGGCTTTTGATAGAACGAGTTCTGAAAGAGGAATTTCAACATACAGCATACGCAACGAATGCTTATGTATCACTGGGTCTGTTGGCAAAGCAGGTTATGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64430.p1 GENE.R_Transcript_64430~~R_Transcript_64430.p1 ORF type:3prime_partial len:572 (+),score=130.98,DEAD|PF00270.25|4.7e-19,DEAD|PF00270.25|5.8e+02,DEAD|PF00270.25|2.3e+03,Helicase_C|PF00271.27|6.1e+03,Helicase_C|PF00271.27|9.7e+02,Helicase_C|PF00271.27|5.8e-17,Helicase_C|PF00271.27|1.6e+04,RecQ_Zn_bind|PF16124.1|6.2e-12,RecQ_Zn_bind|PF16124.1|1.6e+04 R_Transcript_64430:176-1888(+)
MDATNQILGELLNVEAELQDVQDQIKALLDQQEMLYARQSELKALLNDCEASGSQCDDGGSTVEENWSASFEWDSQADDLRLNIFGISSYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILRDGIALVVSPLLSLIQDQVMGLTALGIPANMLTSTTSKEDEKFIYKALEKNEGELKILYVTPEKISKSKRFMSKLEKCHHGGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPTVPVIALTATATRKVQLDLMEMLHIPKSVKFVSTVNRPNLFYMVREKSSVGKVVVDEIAEFIKGSYPNNESGIVYCFSRKECEQVAKELRERGIKADHYHADMDIRDRENVHMRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPAECLLYYRPADVPRQSSMVFYENSGLQNLYDIVQYCQSRSECRRAAIFRHFAEPLGDCNGMCDNCVSSTEFKDVDASGHAKAMISLIQDIQENDQRITMLQLVDKMKVKQKELRVDLKRDHMEQLVIRLLIERVLKEEFQHTAYATNAYVSLGLLAKQVML

Click here to download the sequence:
Link to NCBI Protein BLAST