Transcript Information: R_Transcript_64451.p1


Annotated TAIR IDAT1G21410.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)SKP2A
Annotation TypeOrtholog
Chromosome Positionchr1:7497479-7499386 | Forward length=360
E-Value1E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1421.57038621018
Replicate 2262.08981932984
Replicate 3324.23723509434
Condition 2: 8 Hour
Replicate 1218.54450660915
Replicate 2274.88977410097
Replicate 3255.81669900999
Condition 3: 24 Hour
Replicate 1229.57807227704
Replicate 2153.91630004437
Replicate 3220.16112554394


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64451.p1 GENE.R_Transcript_64451~~R_Transcript_64451.p1 ORF type:complete len:375 (+),score=60.08,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|0.0013,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|11,LRR_4|PF12799.3|0.0078,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|4.4e+03,LRR_4|PF12799.3|1.1e+04,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|6.3e+02,LRR_6|PF13516.2|1.6e+02,LRR_6|PF13516.2|0.47,LRR_6|PF13516.2|3.3,LRR_6|PF13516.2|28,LRR_6|PF13516.2|1.1,LRR_6|PF13516.2|1.8e+02,LRR_6|PF13516.2|1.6e+04,F-box-like|PF12937.3|8.8e-06 R_Transcript_64451:175-1299(+)
ATGGCAAGGCATGAAGGATTAAGAAGTGAGGACTTGGACTCCTGCTTCAAGAAGCTAATGGTGTTTGGTGCTGTTACTTTAGCTGCTGGTGGTGGTGAAGGTGGAAAAATCGACGGTGGCGATATGATGGCCAAGTGGAATGATATTCCTATGGAGCTTCTATTGAGGATTCTGTCCCTTGTTGATGATCAAACAGTGATCAAGGCTTCTTGGGTGTGTAGTGGCTGGAGGGAAGCTATTTGCCTCGGCATAACTCGCCTTTGTCTATCATGGTGCAAGAATGACATGAACAACCTAGTTCTGGCCCTTGCACCAAAATTCACACGTTTGCAGAGTCTTATACTTCGCCAAGACAAACCACAACTCGAAGATAATGCTGTTGAGATGATAGCAAACTTCTGTCATGACCTACAGGAACTTGACTTGAGCAAAAGCTTCAAGCTAACAGATCGTTCTCTGAATGCCTTGGCTCACGGTTGCCCGAACCTTACCAAGCTTAACATCAGTGGGTGTACAGCTTTTAATGATGCTGGGCTTGCATATTTGACTAGCTTTTGCAAAAAGTTGAAGTCGTTGAATCTTTGTGGATGTGTGCGGGCTGCAACTGATAGGGCATTACAGGCCATTGCATATAACTGCAGTGAGCTGCAAAATCTCAATTTGGGGTGGTGTGAGAACGTTAGCGATTTGGGTGTGACAAGTCTGGCATATGGTTGCCCGAATCTCAGAGCCCTTGACTTGTGTGGATGTGTTCTTATAACAGATGAAAGTGTGATTGCTTTAGCAAATAGATGCCCTCGTCTCAGATCTCTTGGGCTCTACTACTGCCAGAACATCACTGACAGAGCTATGTACTCGCTGGCACATAGCCGGGTGAAGAACAAGCATGGTGTGTGGCAGCCAATGAAAAGCCGATACGAAGATGATGGCCTCATGAACCTCAACATCAGTCAGTGCACTGCACTGACCCCTCCAGCCGTTCAGGCTGTGTGCGACTCATTTCCGGCCCTTCACACTTGTCCTGGAAGGCATTCTCTAATCATAAGCGGTTGCCTGAATCTGACATCAGTTCATTGTGCCTGTGCTGTTCATGCACACCGTGCAACAAGCACAGCCGCTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64451.p1 GENE.R_Transcript_64451~~R_Transcript_64451.p1 ORF type:complete len:375 (+),score=60.08,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|0.0013,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|11,LRR_4|PF12799.3|0.0078,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|4.4e+03,LRR_4|PF12799.3|1.1e+04,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|6.3e+02,LRR_6|PF13516.2|1.6e+02,LRR_6|PF13516.2|0.47,LRR_6|PF13516.2|3.3,LRR_6|PF13516.2|28,LRR_6|PF13516.2|1.1,LRR_6|PF13516.2|1.8e+02,LRR_6|PF13516.2|1.6e+04,F-box-like|PF12937.3|8.8e-06 R_Transcript_64451:175-1299(+)
MARHEGLRSEDLDSCFKKLMVFGAVTLAAGGGEGGKIDGGDMMAKWNDIPMELLLRILSLVDDQTVIKASWVCSGWREAICLGITRLCLSWCKNDMNNLVLALAPKFTRLQSLILRQDKPQLEDNAVEMIANFCHDLQELDLSKSFKLTDRSLNALAHGCPNLTKLNISGCTAFNDAGLAYLTSFCKKLKSLNLCGCVRAATDRALQAIAYNCSELQNLNLGWCENVSDLGVTSLAYGCPNLRALDLCGCVLITDESVIALANRCPRLRSLGLYYCQNITDRAMYSLAHSRVKNKHGVWQPMKSRYEDDGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLNLTSVHCACAVHAHRATSTAAH*

Click here to download the sequence:
Link to NCBI Protein BLAST