Transcript Information: R_Transcript_64500.p1


Annotated TAIR IDAT5G58510.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23648287-23654421 | Reverse length=963
E-Value8.3E-215
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.470258108942
Replicate 215.455610028664
Replicate 317.816351463674
Condition 2: 8 Hour
Replicate 117.004072880031
Replicate 219.876339414387
Replicate 322.941618978545
Condition 3: 24 Hour
Replicate 118.3571355412
Replicate 213.828297240918
Replicate 318.370037862217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64500.p1 GENE.R_Transcript_64500~~R_Transcript_64500.p1 ORF type:complete len:504 (+),score=123.36,Rab3-GTPase_cat|PF13890.2|1.3e-58,Rab3-GTPase_cat|PF13890.2|5.9e+03 R_Transcript_64500:1614-3125(+)
ATGCTTTGGATTGAATTTGTTCGAGAAGTTCGTTGGTGCTGGGAAGAGTCTCAGCCATTACCCAAAATTCCAGCCAATGGTGTCATTGATCTGTCTTCTTGTTTGATTCATCAGAAATTACAGATGCTTGCAATTTGTATTGAGAAGAAGCGTGAAGTGAATGCAGAGTTCTTTGATGCTGAAGGCAAAGATGAAGTGTCAGTTTATAGTGAGGAGGAAGATCAACTTCAGGAAGACTTGTTGCACAGGTCTAGTCCTGTTGGAAATCTGAACAATGAAACACAGAGCACTGAGAGGCAAGATGATCGTTTTGATACTGGAGGAAAAGGTAACGAGACTAACACCCTTGAAGAAGCATCTGATCGCATTAGAAGAGGGTCAGCAGGTGTTGCAGGATCCATGATGCTAATGAATTCGCACCAGAGAATGCATGCTCCATTTACTCAGGATGCACCACCAATGACAGAAGATATGCATGAAGAACGGCTGCATGCTGTTGTAGCATTCGGTGATTCTTTTAGTTTTTCTGCTCAGCTAGAGAGAGAGATCTTATTGTCAGACATGTCAGCTTTCAAAGCAGCGAATCCAGATGCTGTATTTGAGGATTTTATTCGTTGGCATTCACCTGGGGATTGGGAAAATGATGGAAAAGAGGATGGTAACGTTTCAGGAACTGCAGAAAATGATGATTGGCCTCCAAAGGGACGACTCTCCAAGAGAATGTCTGAGCAAGGGAACTTTTGGCGGAAATTATGGAATGATGCACCAGCTTTGCCAGCTTATGATCAGAAACCACTTTTTGATCCAAATCGAGAAGGAGAAAAGATTCTTCATTACTTGGAGACATTGCGACCTCATCAGCTGCTCGAGCAGATGGTTTGTACTGCATTCAGAGCCTCAGCTGATACATTAAACCAGACAAACTTTGGTGACTTGACTCCAATGAAGACCAAGCTTGATCAGCTTTACCTAACTATGGCCTCTGTGCTAAGAACTTTGCAAGCAAATCAACTTTCTCAGGACGGTGAGATTTTCGAAGATCTCAAACGGCTGTGTGTCATATTTGAACATGTGGAGAGATTGACAATTCTAGCAGCTTCTCTTCACCGGAAGTTTATTGAGGCGCCACGGCTTTCCAGAGCAATATTCAGTGACTTCTACAACTTCTATCTTCCCAGAATGGGTAATAGTACCCTTGAAGTTGACTTTCACAAGGAGTTTGACCAAAACCAGGCAGTAAGGATGGATGAAAGGAATGTTGTGGCAGATCTATTCACACCTCCTACCCCTAATCAGTCATGGAGAAAAGTTTTAAGCATGGGGAATCTTCTTAATGGCCATGAACCAGTGCTTAGAGAAATAATATTTTCGATGCGTGATGATGTTACTGGTCATCATTATGCAGGCCATTCTCCTACAGGTTTTCAACAAGAGATCGAAACTTACCGCATGTATATACACGGAACCTCAAATGACCTCAGGGTGGCACTTTCCGTAGTCTCATGTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64500.p1 GENE.R_Transcript_64500~~R_Transcript_64500.p1 ORF type:complete len:504 (+),score=123.36,Rab3-GTPase_cat|PF13890.2|1.3e-58,Rab3-GTPase_cat|PF13890.2|5.9e+03 R_Transcript_64500:1614-3125(+)
MLWIEFVREVRWCWEESQPLPKIPANGVIDLSSCLIHQKLQMLAICIEKKREVNAEFFDAEGKDEVSVYSEEEDQLQEDLLHRSSPVGNLNNETQSTERQDDRFDTGGKGNETNTLEEASDRIRRGSAGVAGSMMLMNSHQRMHAPFTQDAPPMTEDMHEERLHAVVAFGDSFSFSAQLEREILLSDMSAFKAANPDAVFEDFIRWHSPGDWENDGKEDGNVSGTAENDDWPPKGRLSKRMSEQGNFWRKLWNDAPALPAYDQKPLFDPNREGEKILHYLETLRPHQLLEQMVCTAFRASADTLNQTNFGDLTPMKTKLDQLYLTMASVLRTLQANQLSQDGEIFEDLKRLCVIFEHVERLTILAASLHRKFIEAPRLSRAIFSDFYNFYLPRMGNSTLEVDFHKEFDQNQAVRMDERNVVADLFTPPTPNQSWRKVLSMGNLLNGHEPVLREIIFSMRDDVTGHHYAGHSPTGFQQEIETYRMYIHGTSNDLRVALSVVSCD*

Click here to download the sequence:
Link to NCBI Protein BLAST