Transcript Information: R_Transcript_64529.p1


Annotated TAIR IDAT3G48430.1
Annotated Gene Namerelative of early flowering 6
Annotated Gene Symbol(s)REF6
Annotation TypeOrtholog
Chromosome Positionchr3:17935609-17940456 | Forward length=1360
E-Value3.4E-252
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3986806933498
Replicate 24.7415780756636
Replicate 35.9651278567257
Condition 2: 8 Hour
Replicate 16.635548440185
Replicate 27.069636601871
Replicate 39.3384080044193
Condition 3: 24 Hour
Replicate 19.8344311836389
Replicate 27.3465647116108
Replicate 38.4646874865347


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64529.p1 GENE.R_Transcript_64529~~R_Transcript_64529.p1 ORF type:complete len:1417 (+),score=334.46,JmjC|PF02373.18|6.6e-37,JmjN|PF02375.13|1.8e-14,zf-C2H2_4|PF13894.2|12,zf-C2H2_4|PF13894.2|0.057,zf-C2H2_4|PF13894.2|1.6e+02,zf-C2H2_4|PF13894.2|3.1,zf-C2H2|PF00096.22|3.2e+03,zf-C2H2|PF00096.22|6.5,zf-C2H2|PF00096.22|0.08,zf-C2H2|PF00096.22|72,zf-C2H2|PF00096.22|0.086 R_Transcript_64529:308-4558(+)
ATGGGCAGTTCAAGTGTAACAGCAGAGTATGCAAACCCTGAGGTTTTCAGTTGGCTAAAAACCCTACCTGTAGCACCAGAATATCACCCAACAATCCAAGAATTCCAAGATCCAATTGCTTACATTTTCAAGATTGAAAAAGAAGCCTCTAAATATGGGATTTGTAAAATCGTCCCTCCTTTACCCCCTCAATCTAAAAAGTCTGTAATTTCCAACTTCAATCGTTCCCTTTCTTTAACAAACCCTAATTCTTCACAACCCACATTCACCACAAGGCAACAACAAATAGGGTTTTGCCCAAGAAAGCAAAGACCCATTCAGAAATCTGTGTGGCAGAGTGGTGAAACTTATACTCTTCAACAGTTTGAGTCTAAAGCTAAGAGTTTTGAGAAGAGCTACTTGAAAAACAGGACAAAGAAGAGTTTATCACCACTAGAAGTTGAAACCCTTTATTGGAAAGCAAATGGGGATAGACCCTTTTCAGTTGAGTATGCAAATGACATGCCTGGCTCTGCTTTTGTTCCTATGAAGGATAAAAAAACAGGGGAACTTGTGTCTGGTGGGGCCAATACTGTTGGGGATACTGCTTGGAATATGAGGGGAGTTGCTAGGGCTAACGGGTCTTTGTTGAGGTTTATGAAGGAAGAGATTCCTGGGGTTACATCTCCTATGGTTTATGTTGCTATGATGTTTAGCTGGTTTGCTTGGCATGTTGAGGACCATGATTTGCATAGCTTGAATTACTTGCATTTAGGGGCTGGTAAGACCTGGTATGGGGTCCCTCGTGACGCTGCTCCCGCCTTTGAGGAGGTCATCAGGGTTCATGGCTTTGCCGAAGAGATCAACCCCCTTGTTACTTTCGCAACACTTGGAGAGAAGACTACGGTTATGTCGCCTGAAGTACTTATTAACGCGGGAGTACCCTGTTGCAGGTTAGTGCAAAATGCAGGGGAGTTTGTTGTCACTTTTCCACGGGCTTATCATTCAGGCTTTAGTCATGGGTTCAATTGTGGAGAAGCGTCTAATATTGCAACTCCTGAATGGTTGAAGTTTGCGAAAGATGCTGCTATTCGTAGAGCCTCGATAAATTATCCACCTATGGTCTCCCATTTCCAGTTACTCTATGATCTGGCATTAGCAATATGTTCAAGGGTGCCGATGGGTAGCACTGCTGAACCCAGAAGTTCTCGGCTAAAAGATAAGAAGAAGGGTGAAGGGGAAACGTTGGTCAAACAGATGTTTGTGCAGGATGTAATGCAGAATAATGAACTTCTTTACACTCTTGGGCAAGGATCTGAAGTTGTACTTCTCCCTCATAATTCTTCTGAAAAATTTGTCTGGTCCAACCTGCGTGTTGGGTCCAAGTATAAAGTGAAACCTGGATTGCCTTTTAGTTTATATAGTTCAGAAGAAGCAATTAAAGCTTCTGATGACATCATGTTAGCTAGAAATGTTAAGCATCCGAAACCGTCTTGTTCAGTTAAAGGAAAGATCGGCTCCATGATTCAAAAGGCTGGATTTTCATCTCAGATTAGCAGTGGTAGTATGGGCACTTTGTCGCATGCCTCACAGTACTCAGAAACTGAAAAGGGGGGAGGTTCAGGGGGTGATGGATTATCAGAGCGTGGGTTGTTCTCTTGTGTGAAATGTGGTATCTGGACATTTGCTTGTGTTGCCATCGTTCAACCTACTGAGTCTGCTGCCCAGCACCTGATGTCAGCAGAATGTAGCTTCTTTAATGATTGGGTTGCTGGTTCTGGATTGTCGAGTCATGGAATTGATGCGACTGACGCTGAAGCAAATCAGTCAGACCCAGATTCCCTTTCAGGATCGATGGAAAAGAATGCCCCTGATGGGTTGTATGATGTCCCAGTGCAGTCTAATGATTGCAAGCAAAGCATGGATAACATCTCCATGGTGAAGTCAGCTACTGCCGAAAGTATTAAGATTGGCTCATATGATGAAAGAAAGACCTCAGCTCTTGGGTTGTTAGCTATGACATATGGAAACTCTTCTGACTCTGATGAAGATGATGAGCCACCCAATTGTGCTGTTGCTACTGAGGATAACATATCTGGAGATGGTTCATGGGGTGCTAGATTTCACCGTGTTGATTCTATATCACCTACTTCTGAGCAAGCCTATGATAGTGGTTTGGAAAGGGGTCCAAGCCATGTTTCTTCGAGATCGGAATGTGAGGATGAAGAGTCTCCCCGGAGACTTGACTTGTATGGGCACTGTGTGCCCGACAGAGCTAATAGTGATGATAGTGGATACGAAGTTCATGACTGCTCTGCCAAATTTGCAGAAGAGGATACCATGACTTCAGAACAAAATTATTCTCAGACCTATTCCCCTGCTGCTGATGAAAGTAATGCTGGAAAGATTAGCAATGCTATTGACTCAGTTGGCAAGCCAAATTTTCCCTTCCTTCACAGATGTGATGAAGATTCTTCAAGAATGCATGTTTTTTGTCTAGAGCATGCTGTGGAGGTTGAGAAACAACTACGACCATTTGGTGGGGTGCATATCCTACTTCTTTGTCATCCAGACTATCCAAAAGTACAGATTGAAGCAAAGAAGGTGGCAGAAGAGTTGTGCATGGATTATGTTTGGAAAGATATTCCTTTCTCTGAGGCCACCAAAGAAGACGAAGAGCAAATTAAATTGGCACTGCAGAGTGAGGAGGCCACACCGAAAAATGGGGATTGGGCTGTAAAGTTGGGCATCAACCTCTTTTACAGTGCTCTCCTCAGCCGCTCGCCCCTGTACAATAAGCAGATGCCATATAACTCTGTCATATACAGTGCTTTTGGCTGTAGTTCTCCATCTAAATCTTCCCCAGAAACCCATCCCCGTGGCAGGGGGTTTGGTCGGCAGAAAAAATTGGTGGTGGCTGGTAAATGGTGTGGTAAAGTGTGGATGTCAAACCAAGTTCATCCTTTGTTAGTACAAAGAGATCTGGATGGAGAGGAAAGAACTCTAAATGTTGCTTTTAAGGCAGATGAGAATTTTGGGAGAAAATCAGAAAGTAGCAAGAAAGCTCAAACCATCGCTACATACAGAAGGATTGGGCGGAAGAGGAAACTGACAGCAGAGAGTAGGTCCGTAAAGAAACTGAAATTTGAAGCCAGAGAATTTGCAGATACTGATCCTGAAGATTCAGTGGATGATAAGCCTGCCTTTGAACCTAGGAGGAGTGTCAGAAAATCAAAAGCACTCTACAGACCAATCAAGAAAGTGAAACACCAAGAAGAGGAAATCCCAGAGAGTGGCTCAGAAGAATGTCTTGATGATAAACCTCAACCGGGACCCTGGAGAAGTGGTAGATCATTGAGGCCAGCGGGTAAACCAATCCAGAAAGTGAGAGACCGACAAAAGGAAACCATGGATAGTTATTCTGACGATTCAATGGATGATAGGGCTCATCATGGACTGCGGACTGGTAAGAGAACAATAAAGGCCGAAGTGGTTAGGTCTTCCAGAAAGGTGAAAGGCCAACAGAAAGAGATTGTGGAAAGCGAGTCTGAAGGTTCACCAGATGATGTATCTGATCACGAGCATGCAAGGATTATCAGGAGTCCACAATCAGATCTGGGAACTCCTCCATGGCGAGTGTCCAAACAGTTTGAACCAGTCACTGATGATGAGATGGAAGGTGGGCCAAGCACCCGTCTCCGAAGAAGAGCAGCAAGGCCTTCTCAGGAGATAGAAACTAAACCAACAGTGAAGAGGCAGGGACCGAAAACCAAAGGAAAGAAAACTCCAGGCACAAAGAATCCTCCAGCAAGAAAGGGTCCAAAGATGAGGCTTCCAAGAGCTCCAGCAATGAAGGGTCCAGCCAAGAAAGATCCCTCTAACTCTAGTGATGCGGATCTGGAGGAAGAAGAAGCTGAATTTGCCTGTGACATTGAAGGGTGCTCCATGAGTTTCGGGTCAAAGCAAGAGCTTGCTTTGCATAAACGCAATGTGTGCCCAGTCAAGGGATGTGGTAAGAAGTTCTTTTCACACAAATATCTGGTGCAGCACAGGCGCGTCCACATGGATGACCGGCCTCTGAAATGTCCTTGGAAGGGGTGCAGAATGACCTTCAAATGGGCATGGGCACGGACTGAACATATAAGGGTCCACACAGGAGCCCGTCCATATGTCTGCAATGAGCCAGGTTGTGGGCAAACATTCCGGTTTGTCTCAGATTTCAGTCGTCACAAGCGGAAGACTGGTCACTCAGCGAAGAAGGCTAGAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64529.p1 GENE.R_Transcript_64529~~R_Transcript_64529.p1 ORF type:complete len:1417 (+),score=334.46,JmjC|PF02373.18|6.6e-37,JmjN|PF02375.13|1.8e-14,zf-C2H2_4|PF13894.2|12,zf-C2H2_4|PF13894.2|0.057,zf-C2H2_4|PF13894.2|1.6e+02,zf-C2H2_4|PF13894.2|3.1,zf-C2H2|PF00096.22|3.2e+03,zf-C2H2|PF00096.22|6.5,zf-C2H2|PF00096.22|0.08,zf-C2H2|PF00096.22|72,zf-C2H2|PF00096.22|0.086 R_Transcript_64529:308-4558(+)
MGSSSVTAEYANPEVFSWLKTLPVAPEYHPTIQEFQDPIAYIFKIEKEASKYGICKIVPPLPPQSKKSVISNFNRSLSLTNPNSSQPTFTTRQQQIGFCPRKQRPIQKSVWQSGETYTLQQFESKAKSFEKSYLKNRTKKSLSPLEVETLYWKANGDRPFSVEYANDMPGSAFVPMKDKKTGELVSGGANTVGDTAWNMRGVARANGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHLGAGKTWYGVPRDAAPAFEEVIRVHGFAEEINPLVTFATLGEKTTVMSPEVLINAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLKFAKDAAIRRASINYPPMVSHFQLLYDLALAICSRVPMGSTAEPRSSRLKDKKKGEGETLVKQMFVQDVMQNNELLYTLGQGSEVVLLPHNSSEKFVWSNLRVGSKYKVKPGLPFSLYSSEEAIKASDDIMLARNVKHPKPSCSVKGKIGSMIQKAGFSSQISSGSMGTLSHASQYSETEKGGGSGGDGLSERGLFSCVKCGIWTFACVAIVQPTESAAQHLMSAECSFFNDWVAGSGLSSHGIDATDAEANQSDPDSLSGSMEKNAPDGLYDVPVQSNDCKQSMDNISMVKSATAESIKIGSYDERKTSALGLLAMTYGNSSDSDEDDEPPNCAVATEDNISGDGSWGARFHRVDSISPTSEQAYDSGLERGPSHVSSRSECEDEESPRRLDLYGHCVPDRANSDDSGYEVHDCSAKFAEEDTMTSEQNYSQTYSPAADESNAGKISNAIDSVGKPNFPFLHRCDEDSSRMHVFCLEHAVEVEKQLRPFGGVHILLLCHPDYPKVQIEAKKVAEELCMDYVWKDIPFSEATKEDEEQIKLALQSEEATPKNGDWAVKLGINLFYSALLSRSPLYNKQMPYNSVIYSAFGCSSPSKSSPETHPRGRGFGRQKKLVVAGKWCGKVWMSNQVHPLLVQRDLDGEERTLNVAFKADENFGRKSESSKKAQTIATYRRIGRKRKLTAESRSVKKLKFEAREFADTDPEDSVDDKPAFEPRRSVRKSKALYRPIKKVKHQEEEIPESGSEECLDDKPQPGPWRSGRSLRPAGKPIQKVRDRQKETMDSYSDDSMDDRAHHGLRTGKRTIKAEVVRSSRKVKGQQKEIVESESEGSPDDVSDHEHARIIRSPQSDLGTPPWRVSKQFEPVTDDEMEGGPSTRLRRRAARPSQEIETKPTVKRQGPKTKGKKTPGTKNPPARKGPKMRLPRAPAMKGPAKKDPSNSSDADLEEEEAEFACDIEGCSMSFGSKQELALHKRNVCPVKGCGKKFFSHKYLVQHRRVHMDDRPLKCPWKGCRMTFKWAWARTEHIRVHTGARPYVCNEPGCGQTFRFVSDFSRHKRKTGHSAKKARK*

Click here to download the sequence:
Link to NCBI Protein BLAST