Transcript Information: R_Transcript_64533.p1


Annotated TAIR IDAT4G34660.1
Annotated Gene NameSH3 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:16545595-16548294 | Reverse length=368
E-Value6E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.129854240682
Replicate 210.014495591513
Replicate 314.153756563476
Condition 2: 8 Hour
Replicate 116.854768825475
Replicate 219.573346435509
Replicate 317.216974843186
Condition 3: 24 Hour
Replicate 110.887848956228
Replicate 26.8735901691501
Replicate 39.2533385668184


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64533.p1 GENE.R_Transcript_64533~~R_Transcript_64533.p1 ORF type:complete len:369 (+),score=83.55,SH3_1|PF00018.24|5.1e-10,SH3_9|PF14604.2|2.5e-08,SH3_2|PF07653.13|2.2e-06 R_Transcript_64533:337-1443(+)
ATGGAAGCCATTAAAAGGCAAGCTACCAAGCTCAGAGAGCATGTAGCAAAGCAACAACAGGCTCTTCTAAGACAGTTGGGGCATTTTGATGCAGAAGCTATTATCGGAGATGAAGCAGAAGTTGCACGACATCATCTACTTCAAGATTTGTACACTTCTACCAGAGCAGCTAAGCATTTTGAGAAGGATATAGTACGTGGTGTAGAAGGATGCATATCAGTGAGCTCAAAGCAATTGGAAATAGAGAGAAGATTTGGTCAGGACTGTTGCAGATATGAGGCTGAAAATGACTGTAGTACTTCCCCATTGGCAAAAGCTGCCTTGCAAGTTGGCACCTCGCGCAATTTAATGCTAAAGGAAAAGGAGAAGTTGCTTGGAGTTCTAGATGAACAGGTCTGTAAGCCACTTCGAGCACTAGTGAAGAGCGCTGAGCTTGAGGATGCTCGACTTCTGATCAACCAATATGATAGGCTATGGCTGGAAGTGGAAGCTCAGGCAGCCGAAGTCCTAAGACTGAAATCAAAGTCTGTGGAAAGAACAAAATCTGGGGATATCTCTACCAAGATTCAACTTGCTGAAGAAAAATTAAATGAACTCAAATCCAGGTTGATGGCACTTGGAAAAGAGGCGACATCAGCGATGCAATCAGTGGAAGCTCAGCAACAAAAGATGACCTTCCAACAGCTAGTTGTTATGGTGAATGCTGAGAGGTCTTTCCATCACAATATCCTTACAATCTTAGAAAAGTTAATGACAGAGATGATGCAACTGGAACAATTGAGCGAGTCATCACCTCCTGTAAATGATATACCGAGTCAAAAACACATGCTAGAAACAGAGACAAATACTGATTTTAAAGCGATTAAGGAGCATGGGGTAGAAAATGAAGACAAAACATGCTTTTTTGCGAAGGTTGTTCACCCGTTTGAGGCTCAGACTGAGGGGGAGTTAAGCCTCTCACTAGATGACACCGTTGTAGTTCATCAGGTGATTCCCGGTGGCTGGTCTAGAGGGGAATGCAATGGAAAAATGGGGTGGTTTCCTTCCCCTTATCTGGAAAAGTTAGATGAGATTTCAGCAGGCCAAATGACCAGGATAAACAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64533.p1 GENE.R_Transcript_64533~~R_Transcript_64533.p1 ORF type:complete len:369 (+),score=83.55,SH3_1|PF00018.24|5.1e-10,SH3_9|PF14604.2|2.5e-08,SH3_2|PF07653.13|2.2e-06 R_Transcript_64533:337-1443(+)
MEAIKRQATKLREHVAKQQQALLRQLGHFDAEAIIGDEAEVARHHLLQDLYTSTRAAKHFEKDIVRGVEGCISVSSKQLEIERRFGQDCCRYEAENDCSTSPLAKAALQVGTSRNLMLKEKEKLLGVLDEQVCKPLRALVKSAELEDARLLINQYDRLWLEVEAQAAEVLRLKSKSVERTKSGDISTKIQLAEEKLNELKSRLMALGKEATSAMQSVEAQQQKMTFQQLVVMVNAERSFHHNILTILEKLMTEMMQLEQLSESSPPVNDIPSQKHMLETETNTDFKAIKEHGVENEDKTCFFAKVVHPFEAQTEGELSLSLDDTVVVHQVIPGGWSRGECNGKMGWFPSPYLEKLDEISAGQMTRINK*

Click here to download the sequence:
Link to NCBI Protein BLAST