Transcript Information: R_Transcript_64544.p1


Annotated TAIR IDAT1G61140.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Annotated Gene Symbol(s)EDA16
Annotation TypeOrtholog
Chromosome Positionchr1:22535038-22540610 | Reverse length=1280
E-Value5.3e-309
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5854518065921
Replicate 24.4229911532693
Replicate 35.7830124423073
Condition 2: 8 Hour
Replicate 15.4591436603694
Replicate 26.8182361023943
Replicate 39.2394673731642
Condition 3: 24 Hour
Replicate 16.5862561718823
Replicate 25.6945955332228
Replicate 36.0460299012167


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64544.p1 GENE.R_Transcript_64544~~R_Transcript_64544.p1 ORF type:complete len:1220 (+),score=278.13,SNF2_N|PF00176.19|4.6e-71,Helicase_C|PF00271.27|1.8e-14,zf-C3HC4_2|PF13923.2|2e-06,zf-C3HC4|PF00097.21|5.9e-06,zf-C3HC4_3|PF13920.2|6.6e-06 R_Transcript_64544:305-3964(+)
ATGACGGCGACTGAGGAAGAAGGTTTTAATTTCGGTTCGATGAGTGATTTCTTTGGTGGTGTTGGTGATGACGATGATTGTGCTATTGACGCTGATTCTTTCTTCGAGATTCTTAATGAAGGGATTGATAATTCCGTTCCTTTACCGACTGATCCGTTCTATCCATCAACTGACAATAATCAAGAGTGTGGGTCATCTGGTCATGGTTGCAGTCATGAGAACTTGCCTCTTCACCAAGATTGTGGTGTTTTGAGCGAAAACAGTGGCGAGACAGTGGAAGCTCAACAGCAATTTGCTTTCAGATCTCCAGCAGAATCCTTGTTTGCTGAATTTAATGGAACTTCGTCAATGAGTAAAAGTGGCATTCATTCTCAGTTCTGCCAAATACCTAATTTTGTAGAGCCAAACTATGTTCAGTCTACCCAGGATTGGTTCAGCGAGTTAAATGGCTCTTCTGGTTATCCAAATCAGAATCTGTTTGATGGTGCAAACTATAATTTGATGTTGACGAATGGACAAGTAATGGGTAACATGAGCAGTGATGTAGATGATTCTCAGCCTTCTCCATGGTTGGAGAACAATAGAGCCTTAGAGGTTCAAGTGGGAGATGCAAATATGACTGCTTCAGTGGCTCCAGTATATGATTTCTTTGACGGACAGGAACCTGAATCAGTCCTTCTTGGTAGTCACTCTGCAAATACTTATGATAGCAGTAGTAGTTCAACCACTGATGAGACTTCAGTAGATCCGTTATTGCGGGGACTGATGGACAAGTCATGTGAAAAGCAAGCAGCTGTTGAAATTAATAATGAACTACTAAACAATTTTGAATGCAAATCATCAGAAGCAAACAAAGAAGGTCCATTCCATGGCTGTTCGTTTGGTTCTAAAGCTGGGAACTTTTCTGCATCGACTGAAGCTCATTATTCCACAGGTACCCCTGGTTGTCCTCCTGCTCATTACCATATTCCCACTATTGACAGAAAACCAGCCAAATTGCGGCCGTTGGAAAAGCCATTATCTTCTGCAAACACAGTTCGAACATTTGGCAACTTGTCTTTTAAGAAGGAAGAAGTAGAGGAAAAACTGGTTCAACTGGTGAGTGTAAAGGCTGGGACCTTTAAAGGCACTGAGAAGGCAAGCCAAACTAGTTTATCAAGAGGTGGGGGCGAAGAAGAAGATGATGATTTATGCATAATTGAAGACATGAGTCGACCTGGCCATACTTGTACTCCTTCCAATCATGGAAAGTCTCTTCCACAGCGTTCAGCATTTATTCCACAATGTTCACCTATTGTCACACATGTTCACCACATGGGTGCTAGCGGAACAAGACTAAAGGCAAATGATGAACGCTTAATTTTTCAAGCATTAGTTCAGGATCTGTCTCAACCGAAGTCAGAAGCAACACCACCTGATGGCTGTTTGGCTGTACCCCTTCTGAGGCACCAGCGAATTGCATTGTCGTGGATGCAGCAAAAAGAAACATCCAGCTTGCACTGCTCTGGAGGAATTTTGGCTGATGATCAGGGATTAGGGAAGACAGTTTCAACAATTGCTCTTATTCTTATGGAGAGGTCTCCATCTTCAAGAACTTCAAAGAGAGCAGACATAGGTAAGCTAGAAACTCTAGATTTGGACGAGGATGATGGAAACAAAACAGGAAACAGAATTTCATTGAAAGGTCTTGGAACTTCTATTCCAAGGGAGAGGCCTTCTGGTGGGACCCTTATTGTTTGTCCTACTAGTGTGCTTAGGCAGTGGGCGGAGGAACTTCATAATAAAGTCACTGAGAATGCCAACCTTTCTGTGTTAGTCTACCATGGGGGTAACCGGACGAAAGATCCGTGTGAAGTGGCTAAATTTGATGTTGTTCTTACGACATATTCCATTGTGAGCATGGAAGTCCCAAAACAGCCTGTGGTTGTTAAGGATGGAACTGATAAACTGAATCATGATGCTGATGATGCACCTATTTTGTCTAGTAAGAAGAGAAAACATCCGTCATCATCTGATAAAAAACGCTCTAAGAGAGCAATGGACAATGAGTTGCTTGAATCTGCTGCTCGCCCGCTTGCGAAAGTGAGATGGTTCAGAGTTGTACTTGATGAGGCTCAGAGCATCAAGAATTTCCGGACTCAAGTTGCCCAAGCCTGTTGGGGTCTTCGTGCAAAACGTCGGTGGTGCTTGTCAGGGACGCCTATTCAAAATGCAGTTGATGATCTTTATAGTTACTTCAGATTTCTCAAGTATGACCCCTATTCTGTGTACAAGTCCTTTTGTTCTATGGTCAAGTTCCCAATCAGTAGAAACCCGTCCAGTGGGTATCGGAAGCTTCAAGCTGTCTTGAAGACTATAATGTTGCGCCGAACGAAAGGTACACTTCTTGATGGGAAACCAATTATTACCTTGCCACCTAAATCTGTAAAACTTGAGAAGGTGGAATTTTCAGAGGAAGAACGTGACTTCTACTCCAGACTGGAAGCAGATTCTCGTGCTCAATTTCAAGCTTATGCAGCATCTGGAACTGTTCAACAAAATTATGTCAACATATTGTTGTTGCTCTTACGGCTTCGACAAGCATGTGATCATCCTCTTCTTGTTAAGGGTTTTGATTCCGGCTCAGTTTTGAAGTCCTCCATCCATATGGCCAAAAAACTAACGCAGGAGCAGCAGACTATTCTTTTAAATTGCTTGGAAGCTTCCTTGGCTATTTGTCACATATGCAATGATCCACCTGAGGATGCTGTTGTTAGTATCTGTGGTCATGTATTCTGCAATCAGTGCATCTCTGAGCGTCTTTCAGGTGATGACTATCAATGTCCTGCACCGAACTGCAAACGTCAGCTCAACGTGTCCTCAGTTTTTTCCAGAGCTACATTGAAGAGTTGTCTTTCAGATCAGATCTCTCAGGATGGTACTCATATATATTCTGCGTCTGAGTCCTCTGACCAAAGAGAGTTGGCTGAAGCTCGACCACCTGGTCATTTTGATTCTTCAAAACTTAAGGCAGCTCTTGAAGTCCTTAAATCACTGTCTAAGCCTCAGGTTTCTCTTTCCAATGACGCCTTCACGAAGCCTGTTGCTGCCAGTACTAGTCCTTTGGAAGAACAAAACACTGTGCCTTCTGGACTAGAAATTAAAAGCTCTGATCCGAGCCATCGTCTGGGCAACGCCAGTTCTATGCTGAAGGAGAAAGCAATTGTGTTTTCTCAATGGACAAGGATGTTGGATTTACTAGAAACTTGCCTAAAGGAATCTTCTATCCAGTACAGGCGACTGGATGGAACTATGTCTGTTCTTGCTCGTGATAAAGCGGTGAAAGATTTTAACACGCTTCCAGAGGTGTCTGTTATGATAATGTCTTTAAAGGCGGCAAGTCTTGGGCTGAATATGGTGGCAGCATGTCATGTTCTTCTTCTGGATCTTTGGTGGAATCCTACTACTGAGGACCAAGCCATTGACAGAGCTCATCGGATTGGACAGACTCGTCCTGTTACAGTTGTGAGGCTGACTGTGAAAGATACGGTTGAAGACCGAATTTTAGCTCTTCAGCAAAGGAAGAGAGAGTTAGTTGCTTCCGCATTCGGAGAAGATGAAACGGGTAGTCGTCAAACTCGCCTTACGGTGGATGACTTGAAATACTTATTTATGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64544.p1 GENE.R_Transcript_64544~~R_Transcript_64544.p1 ORF type:complete len:1220 (+),score=278.13,SNF2_N|PF00176.19|4.6e-71,Helicase_C|PF00271.27|1.8e-14,zf-C3HC4_2|PF13923.2|2e-06,zf-C3HC4|PF00097.21|5.9e-06,zf-C3HC4_3|PF13920.2|6.6e-06 R_Transcript_64544:305-3964(+)
MTATEEEGFNFGSMSDFFGGVGDDDDCAIDADSFFEILNEGIDNSVPLPTDPFYPSTDNNQECGSSGHGCSHENLPLHQDCGVLSENSGETVEAQQQFAFRSPAESLFAEFNGTSSMSKSGIHSQFCQIPNFVEPNYVQSTQDWFSELNGSSGYPNQNLFDGANYNLMLTNGQVMGNMSSDVDDSQPSPWLENNRALEVQVGDANMTASVAPVYDFFDGQEPESVLLGSHSANTYDSSSSSTTDETSVDPLLRGLMDKSCEKQAAVEINNELLNNFECKSSEANKEGPFHGCSFGSKAGNFSASTEAHYSTGTPGCPPAHYHIPTIDRKPAKLRPLEKPLSSANTVRTFGNLSFKKEEVEEKLVQLVSVKAGTFKGTEKASQTSLSRGGGEEEDDDLCIIEDMSRPGHTCTPSNHGKSLPQRSAFIPQCSPIVTHVHHMGASGTRLKANDERLIFQALVQDLSQPKSEATPPDGCLAVPLLRHQRIALSWMQQKETSSLHCSGGILADDQGLGKTVSTIALILMERSPSSRTSKRADIGKLETLDLDEDDGNKTGNRISLKGLGTSIPRERPSGGTLIVCPTSVLRQWAEELHNKVTENANLSVLVYHGGNRTKDPCEVAKFDVVLTTYSIVSMEVPKQPVVVKDGTDKLNHDADDAPILSSKKRKHPSSSDKKRSKRAMDNELLESAARPLAKVRWFRVVLDEAQSIKNFRTQVAQACWGLRAKRRWCLSGTPIQNAVDDLYSYFRFLKYDPYSVYKSFCSMVKFPISRNPSSGYRKLQAVLKTIMLRRTKGTLLDGKPIITLPPKSVKLEKVEFSEEERDFYSRLEADSRAQFQAYAASGTVQQNYVNILLLLLRLRQACDHPLLVKGFDSGSVLKSSIHMAKKLTQEQQTILLNCLEASLAICHICNDPPEDAVVSICGHVFCNQCISERLSGDDYQCPAPNCKRQLNVSSVFSRATLKSCLSDQISQDGTHIYSASESSDQRELAEARPPGHFDSSKLKAALEVLKSLSKPQVSLSNDAFTKPVAASTSPLEEQNTVPSGLEIKSSDPSHRLGNASSMLKEKAIVFSQWTRMLDLLETCLKESSIQYRRLDGTMSVLARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRLTVKDTVEDRILALQQRKRELVASAFGEDETGSRQTRLTVDDLKYLFMA*

Click here to download the sequence:
Link to NCBI Protein BLAST