Transcript Information: R_Transcript_64559.p1


Annotated TAIR IDAT5G24120.1
Annotated Gene Namesigma factor E
Annotated Gene Symbol(s)SIGE, SIG5, ATSIG5
Annotation TypeOrtholog
Chromosome Positionchr5:8157794-8159746 | Reverse length=517
E-Value4.3E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8826243319383
Replicate 26.5537585114456
Replicate 36.8852621676296
Condition 2: 8 Hour
Replicate 12.5004833183121
Replicate 23.6191022633133
Replicate 33.6373169643935
Condition 3: 24 Hour
Replicate 110.97020460977
Replicate 28.7116147833687
Replicate 39.7840992049329


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64559.p1 GENE.R_Transcript_64559~~R_Transcript_64559.p1 ORF type:complete len:519 (+),score=116.79,Sigma70_r3|PF04539.12|9.4e+02,Sigma70_r3|PF04539.12|1.5e-07,Sigma70_r3|PF04539.12|3.5e-12,Sigma70_r3|PF04539.12|5.1e+03,Sigma70_r4|PF04545.12|12,Sigma70_r4|PF04545.12|3.8e+02,Sigma70_r4|PF04545.12|1.8e-12,Sigma70_r2|PF04542.10|2.3e-11 R_Transcript_64559:284-1840(+)
ATGGGAGTTGTGACTATTTCCAGCTCAGCTTCTCGGGCATCATTGGGATTAAGCAAGAGAATCACAGCTCATCAATCTACTTTAAACAAGCCTTTGATTTTAAGCTTCAAAACAGATAAAAAGAAAAGTAGAGCCTTAGTTGCAACTAGTGAGCCTATCCGCTTGGGTTTGCAGACAAAGAAGGATAATCAGAAGAAACTGAGATCATCTACTAAGCCTTCAAAAGGAAAACGAGCTGCTACCAGAACTGAAGTTTCCCCATATGCGGCTGAACAGGAACTGGATTTCAATGAAGCAGCAGCCAAGCTTGAAAGTATCTTTAAGCTTAGTCCTGCAACAGATGCTTCTGATACGGATAACTTTGATAATGTAGTAACAAAAAGCCGAAGAAGGAGAAAGACAAGTACTGAAGTTGATGAGAAAAAAGAGAAAGCAAGTACTGCTAATGTGGTGAGAAACAGAACGAGGAAGGCGAAACGGTTGAGCCTCGATAAGAGAATTGAAATGAAAAGGAATAAGGAAGAAAAAGTGGTTCCTCTGACACTAAAGAAGAAAGCAGGTAACAATGGAGATGAAAAGATAGAGGAGCTTGTAAGGGAGTATTCTGCCTCGACTGATTTGGTCAGCTTGGATTGGAAGAAGATGAAGATTCCTCCAGTTCTTCCATCTTCTGAGCATGCTTGGTTGTTCAAATTGATGGAGCCAACAAAGGCCCTACAGCAAGTGAAAGAGAACCTACAGAGAGAACTGGGGAGAGATCCTACAGACTCTGAATTAGGAGAGGCAATGAATATGACAGTAGTTCAAGTTAGAAGGCGCTTGGAGATTGGTCATGCTGCAAGAAACAAATTGATTAAGCATAACCTGAGATTGATACTGTTTGTGATGAACAAATATTTCCAAGACTTCACAAATGGGCCAAAATTTCAAGACTTGTGTCAAGCAGGAGTTAAGGGTTTGATTACTGCCATAGATCGCTTTGAACCAAGGAGGAAGTTTCGGCTGTCCACGTATGCTCTATTTTGGATCAGGCATGCCATTATCCGTTCAATGACCGTGTCAAGCTTTACTCGTGTCTCCTTTGGTCTGGAATCGGTGAGGGTGGAAATCCAGAAAGCCAAATTAGAACTGATGTTTGAGCTTAAGAGGATGCCAACAGAAGAAGAAATAATGGAAAGGGTAGGAATTTCCCCTGAAAGATATCAAGAAGTGATGAGAGCTGCAAATCCCATCTATTCCCTACATTCTAGACATATAGTCACACAAGAAGAGTTCATTGATGGCATTACTGACGTTGATGGTGTTGGGGGCGACAAAAGAAGGCAACCGGCCCTTCTAAGGCTTGCCCTTGATGATGTGCTTGACTCTTTGAAACCCAAGGAGAGCTTGGTCATCAGGCAAAGATATGGACTAGATGGTAAAGGAGATAGAACGTTGGGAGAAATCGCAGGTAACTTTAATATTTCGAGAGAAATGGTCAGGAAGCACGAAATGAAAGCTCTATTGAAGCTTAAACATCCAACTCGAATGGATTATCTTCGTCGTTATGTACACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64559.p1 GENE.R_Transcript_64559~~R_Transcript_64559.p1 ORF type:complete len:519 (+),score=116.79,Sigma70_r3|PF04539.12|9.4e+02,Sigma70_r3|PF04539.12|1.5e-07,Sigma70_r3|PF04539.12|3.5e-12,Sigma70_r3|PF04539.12|5.1e+03,Sigma70_r4|PF04545.12|12,Sigma70_r4|PF04545.12|3.8e+02,Sigma70_r4|PF04545.12|1.8e-12,Sigma70_r2|PF04542.10|2.3e-11 R_Transcript_64559:284-1840(+)
MGVVTISSSASRASLGLSKRITAHQSTLNKPLILSFKTDKKKSRALVATSEPIRLGLQTKKDNQKKLRSSTKPSKGKRAATRTEVSPYAAEQELDFNEAAAKLESIFKLSPATDASDTDNFDNVVTKSRRRRKTSTEVDEKKEKASTANVVRNRTRKAKRLSLDKRIEMKRNKEEKVVPLTLKKKAGNNGDEKIEELVREYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMEPTKALQQVKENLQRELGRDPTDSELGEAMNMTVVQVRRRLEIGHAARNKLIKHNLRLILFVMNKYFQDFTNGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRMPTEEEIMERVGISPERYQEVMRAANPIYSLHSRHIVTQEEFIDGITDVDGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNFNISREMVRKHEMKALLKLKHPTRMDYLRRYVH*

Click here to download the sequence:
Link to NCBI Protein BLAST