Transcript Information: R_Transcript_64636.p1


Annotated TAIR IDAT1G69290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26047372-26049348 | Reverse length=658
E-Value4.8E-288
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9562784490185
Replicate 21.8084404738125
Replicate 33.5112517483153
Condition 2: 8 Hour
Replicate 12.788171483044
Replicate 24.668038106992
Replicate 35.2732416254847
Condition 3: 24 Hour
Replicate 14.0553206927769
Replicate 22.994363615801
Replicate 34.6012109122821


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64636.p1 GENE.R_Transcript_64636~~R_Transcript_64636.p1 ORF type:5prime_partial len:685 (+),score=167.30,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|0.86,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|1.8e-10,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.1,PPR|PF01535.16|5.6,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|0.07,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|7.3e+03,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|35,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|58,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|48,PPR_3|PF13812.2|0.00067,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|96,PPR_1|PF12854.3|3.6e+03,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|3.7e+03,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|7.1e-07,PPR_1|PF12854.3|5.9 R_Transcript_64636:1-2055(+)
GGAAAGAGCACAACAGAGCAGAGAAAAGAAGTCAAAACATCAGAGAATTCAATGTGGAGAAGAAAGTTTCCCTATCTCATTCCGCCATTACTACCACAACCAAACAAACCCTTCTCATCATCTTCATCTCCTTCAACCCCATCATCTCTTTACTCTTTTCTTCAACCCTCCCTTTTCTCTCTCAAACCCACTTCACCATCAACAAAATCTCCTCAAACCCCAGAAAACAAAACCCCAATCCCAAACACACCCTTAACCCCAGAAAACAAAACATCCCTTGAAACCACTCTTCACAACTCTCTCTCCTCTTCCAACACTGATGAAGCTTGGAAGTCCTTCAAGTCACTCACCAACACCTCCTCTTTCCCAAGTAAGTCCCTCGCAAATTCCTTAATTACCCATTTGTCCTCTCTCTCTGATGTGCTTAATCTCAAAAGGGCTTTTGCTTCTATTGTTTTTTTGATTGAGAAAAATCCCGTCTTGCTTGAACATGATTCTGTGAAGAGGGTTTTGTCTTCTATGGCTGTTGCTAATACTCCTGCCCCTGCTTTTGCTCTTGTTAAATGTATGCTAAAGAATAGATTTTTTGTCCCCTTTGATGTGTGGGGTCCTGTTCTTGTTGATATTAGTAGGAAAAATGGTAGCTTTGTTGCTTTTTTGGGTGTTTTTCATGAGAATTGTAGGGTTGCTTTGGATGAGAAGTTGGATTTTATGAAACCTGATCTGGGTTCTTGTAATGCTGCATTGGAGGGCTGTTGTTACGGTCTTGAATCAGTGAAGGAAGCCGAGAGGGTTATCGAGTTGATGGCCCTTTTGGGTGTTAGGCCTAATGAAATGAGTTTAGGTTTGCTTGGTTATTTGTATGCCTTGAAGGGTCTCGAGGGGAAGATTGTCGAGTTGGAGGATTTGATGCGTGGATTTGCGTTTACGAACAAAGTGGCATTCTTGAGTTACTTGGTTCAGGGTTATGTCAAGTCAGGAAGTTTAGAGTTAGTGTCTAGGACTATTTTGCGGAGTTTGAAGGAAAGGGAGGGGGAGTGTTCAGAGTTCAGTGAGGAGGTTTACTGTGAAGTGGTGAATGGATTTCTAGCTCATGGAAATGTCAAAGATTTAGCTGCGCTGATTGTTGAAGCTCAATTGTTGGAACCTGAATCTGTCATCGCGGAAAAGTCTATTGGTTTTGGCATTATTAGTGCTTGTGTTAATCTCAGGATGTTGGATAAGGCTCATAGTATATTAGATGAGATGAACGCTCAGGGTGCTGCCGTTGGACTTGGGGTCTATTTGTCAATTTTAAGGGCCTACCCTAAAGAGCAGAGAACAGCTGAAGCTGCTCAATTGGTTGCTGAGATTAGTGGTTCTGGCCTCCAATTGGATGCTAGCTGTTATGATGCATTAATAGAAGCATCTATGTCGAGCCAGGATTTTCAGTCTGCATTTTCATTGTATAGGGACATGAGGAATGCAAGAATTTATGAATTGAAAGGAAGCTACCTTACTATAATGACTGGATTAACTGAAAATAATCGTCCTGAATTGATGGCAGCCTTCTTGGATGAGGTTGTTGAGGATCCTCACATTGAAGTGGGAACACATGATTGGAGTTCTATTATACATGCTTTCTGTAAGGCTGGTCGGCTAGAAGATGCTAGGAGGACTTTTAGGAGGATGGTCTTTCTGCAATTTCAACCTAATGAGCAGACATATTTGTCCTTGATCCATGGTTATGTATCTGCAGAAAAGTACTTCAATGTGTTGATGCTATGGAATGAGGTTAAAAAGCGAACACCAACTGGTGACTCAAATGGTTTTAAGTTAGATCAAACGCTGATTGATGCTTTCCTTTATGCTTTGGTAAAAGGAGGCTTCTTTGATGCTGTGATGCAAGTGGTGGACAAATCTCAAGAGTTGAAGATTTTTGTTGATAAATGGAGATACAAGCAAGCATTCATGGAGAGCCATAAGAAACTTAAAATATCTAAGCTGAGAAGAAGAAACTTCAGAAAAATGGAAGCCCTGATTGCATTCAAAAATTGGGCAGGCTTGAATGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64636.p1 GENE.R_Transcript_64636~~R_Transcript_64636.p1 ORF type:5prime_partial len:685 (+),score=167.30,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|4.8,PPR_2|PF13041.2|0.86,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|1.8e-10,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.1,PPR|PF01535.16|5.6,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|0.07,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|7.3e+03,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|35,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|58,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|48,PPR_3|PF13812.2|0.00067,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|96,PPR_1|PF12854.3|3.6e+03,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|3.7e+03,PPR_1|PF12854.3|4.4,PPR_1|PF12854.3|7.1e-07,PPR_1|PF12854.3|5.9 R_Transcript_64636:1-2055(+)
GKSTTEQRKEVKTSENSMWRRKFPYLIPPLLPQPNKPFSSSSSPSTPSSLYSFLQPSLFSLKPTSPSTKSPQTPENKTPIPNTPLTPENKTSLETTLHNSLSSSNTDEAWKSFKSLTNTSSFPSKSLANSLITHLSSLSDVLNLKRAFASIVFLIEKNPVLLEHDSVKRVLSSMAVANTPAPAFALVKCMLKNRFFVPFDVWGPVLVDISRKNGSFVAFLGVFHENCRVALDEKLDFMKPDLGSCNAALEGCCYGLESVKEAERVIELMALLGVRPNEMSLGLLGYLYALKGLEGKIVELEDLMRGFAFTNKVAFLSYLVQGYVKSGSLELVSRTILRSLKEREGECSEFSEEVYCEVVNGFLAHGNVKDLAALIVEAQLLEPESVIAEKSIGFGIISACVNLRMLDKAHSILDEMNAQGAAVGLGVYLSILRAYPKEQRTAEAAQLVAEISGSGLQLDASCYDALIEASMSSQDFQSAFSLYRDMRNARIYELKGSYLTIMTGLTENNRPELMAAFLDEVVEDPHIEVGTHDWSSIIHAFCKAGRLEDARRTFRRMVFLQFQPNEQTYLSLIHGYVSAEKYFNVLMLWNEVKKRTPTGDSNGFKLDQTLIDAFLYALVKGGFFDAVMQVVDKSQELKIFVDKWRYKQAFMESHKKLKISKLRRRNFRKMEALIAFKNWAGLNA*

Click here to download the sequence:
Link to NCBI Protein BLAST